Gene : Lsat_1_v5_gn_3_16260 L. sativa V8
Defline:  (1 of 3) K00948 - ribose-phosphate pyrophosphokinase (PRPS, prsA) Genomic Order:  495
Name:  ? Lsat_1_v5_gn_3_16260 Secondary Identifier:  ? PAC:38917658
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY0-662 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_16260 0.5kb upstream 0.5kb upstream 4221   true Lsat_1_v8_lg_3: 22006342-22010562 Lactuca sativa
Lsat_1_v5_gn_3_16260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 22006342-22006841 Lactuca sativa
Lsat_1_v5_gn_3_16260 0.5kb downstream 0.5kb downstream 4221   true Lsat_1_v8_lg_3: 22006842-22011062 Lactuca sativa
Lsat_1_v5_gn_3_16260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 22010563-22011062 Lactuca sativa
Lsat_1_v5_gn_3_16260 1.0kb upstream 1.0kb upstream 4721   true Lsat_1_v8_lg_3: 22005842-22010562 Lactuca sativa
Lsat_1_v5_gn_3_16260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 22005842-22006841 Lactuca sativa
Lsat_1_v5_gn_3_16260 1.0kb downstream 1.0kb downstream 4721   true Lsat_1_v8_lg_3: 22006842-22011562 Lactuca sativa
Lsat_1_v5_gn_3_16260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 22010563-22011562 Lactuca sativa
Lsat_1_v5_gn_3_16260 2.0kb upstream 2.0kb upstream 5721   true Lsat_1_v8_lg_3: 22004842-22010562 Lactuca sativa
Lsat_1_v5_gn_3_16260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 22004842-22006841 Lactuca sativa
Lsat_1_v5_gn_3_16260 2.0kb downstream 2.0kb downstream 5721   true Lsat_1_v8_lg_3: 22006842-22012562 Lactuca sativa
Lsat_1_v5_gn_3_16260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 22010563-22012562 Lactuca sativa
Lsat_1_v5_gn_3_16260 5.0kb upstream 5.0kb upstream 8721   true Lsat_1_v8_lg_3: 22001842-22010562 Lactuca sativa
Lsat_1_v5_gn_3_16260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 22001842-22006841 Lactuca sativa
Lsat_1_v5_gn_3_16260 5.0kb downstream 5.0kb downstream 8721   true Lsat_1_v8_lg_3: 22006842-22015562 Lactuca sativa
Lsat_1_v5_gn_3_16260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 22010563-22015562 Lactuca sativa
Lsat_1_v5_gn_3_16260 10.0kb upstream 10.0kb upstream 13721   true Lsat_1_v8_lg_3: 21996842-22010562 Lactuca sativa
Lsat_1_v5_gn_3_16260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 21996842-22006841 Lactuca sativa
Lsat_1_v5_gn_3_16260 10.0kb downstream 10.0kb downstream 13721   true Lsat_1_v8_lg_3: 22006842-22020562 Lactuca sativa
Lsat_1_v5_gn_3_16260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 22010563-22020562 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479568 5263 Asterids View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain