Gene : Lsat_1_v5_gn_3_16080 L. sativa V8
Defline:  (1 of 1) PTHR11715:SF1 - GLYCINE CLEAVAGE SYSTEM H PROTEIN 3, MITOCHONDRIAL Genomic Order:  488
Name:  ? Lsat_1_v5_gn_3_16080 Secondary Identifier:  ? PAC:38919312
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_16080 0.5kb upstream 0.5kb upstream 2544   true Lsat_1_v8_lg_3: 21699972-21702515 Lactuca sativa
Lsat_1_v5_gn_3_16080 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 21699972-21700471 Lactuca sativa
Lsat_1_v5_gn_3_16080 0.5kb downstream 0.5kb downstream 2544   true Lsat_1_v8_lg_3: 21700472-21703015 Lactuca sativa
Lsat_1_v5_gn_3_16080 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 21702516-21703015 Lactuca sativa
Lsat_1_v5_gn_3_16080 1.0kb upstream 1.0kb upstream 3044   true Lsat_1_v8_lg_3: 21699472-21702515 Lactuca sativa
Lsat_1_v5_gn_3_16080 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 21699472-21700471 Lactuca sativa
Lsat_1_v5_gn_3_16080 1.0kb downstream 1.0kb downstream 3044   true Lsat_1_v8_lg_3: 21700472-21703515 Lactuca sativa
Lsat_1_v5_gn_3_16080 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 21702516-21703515 Lactuca sativa
Lsat_1_v5_gn_3_16080 2.0kb upstream 2.0kb upstream 4044   true Lsat_1_v8_lg_3: 21698472-21702515 Lactuca sativa
Lsat_1_v5_gn_3_16080 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 21698472-21700471 Lactuca sativa
Lsat_1_v5_gn_3_16080 2.0kb downstream 2.0kb downstream 4044   true Lsat_1_v8_lg_3: 21700472-21704515 Lactuca sativa
Lsat_1_v5_gn_3_16080 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 21702516-21704515 Lactuca sativa
Lsat_1_v5_gn_3_16080 5.0kb upstream 5.0kb upstream 7044   true Lsat_1_v8_lg_3: 21695472-21702515 Lactuca sativa
Lsat_1_v5_gn_3_16080 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 21695472-21700471 Lactuca sativa
Lsat_1_v5_gn_3_16080 5.0kb downstream 5.0kb downstream 7044   true Lsat_1_v8_lg_3: 21700472-21707515 Lactuca sativa
Lsat_1_v5_gn_3_16080 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 21702516-21707515 Lactuca sativa
Lsat_1_v5_gn_3_16080 10.0kb upstream 10.0kb upstream 12044   true Lsat_1_v8_lg_3: 21690472-21702515 Lactuca sativa
Lsat_1_v5_gn_3_16080 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 21690472-21700471 Lactuca sativa
Lsat_1_v5_gn_3_16080 10.0kb downstream 10.0kb downstream 12044   true Lsat_1_v8_lg_3: 21700472-21712515 Lactuca sativa
Lsat_1_v5_gn_3_16080 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 21702516-21712515 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480256 5263 Asterids View MSA
123736891 5271 Pentapetalae View MSA
122788661 5272 Eudicot View MSA
122045381 5273 Angiosperm View MSA
121349488 5274 Embryophyte View MSA
123424429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain