Gene : Lsat_1_v5_gn_3_18820 L. sativa V8
Defline:  (1 of 3) PTHR24221//PTHR24221:SF138 - FAMILY NOT NAMED // LP14331P-RELATED Genomic Order:  554
Name:  ? Lsat_1_v5_gn_3_18820 Secondary Identifier:  ? PAC:38917678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_18820 0.5kb upstream 0.5kb upstream 8746   true Lsat_1_v8_lg_3: 25347479-25356224 Lactuca sativa
Lsat_1_v5_gn_3_18820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 25347479-25347978 Lactuca sativa
Lsat_1_v5_gn_3_18820 0.5kb downstream 0.5kb downstream 8746   true Lsat_1_v8_lg_3: 25347979-25356724 Lactuca sativa
Lsat_1_v5_gn_3_18820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 25356225-25356724 Lactuca sativa
Lsat_1_v5_gn_3_18820 1.0kb upstream 1.0kb upstream 9246   true Lsat_1_v8_lg_3: 25346979-25356224 Lactuca sativa
Lsat_1_v5_gn_3_18820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 25346979-25347978 Lactuca sativa
Lsat_1_v5_gn_3_18820 1.0kb downstream 1.0kb downstream 9246   true Lsat_1_v8_lg_3: 25347979-25357224 Lactuca sativa
Lsat_1_v5_gn_3_18820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 25356225-25357224 Lactuca sativa
Lsat_1_v5_gn_3_18820 2.0kb upstream 2.0kb upstream 10246   true Lsat_1_v8_lg_3: 25345979-25356224 Lactuca sativa
Lsat_1_v5_gn_3_18820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 25345979-25347978 Lactuca sativa
Lsat_1_v5_gn_3_18820 2.0kb downstream 2.0kb downstream 10246   true Lsat_1_v8_lg_3: 25347979-25358224 Lactuca sativa
Lsat_1_v5_gn_3_18820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 25356225-25358224 Lactuca sativa
Lsat_1_v5_gn_3_18820 5.0kb upstream 5.0kb upstream 13246   true Lsat_1_v8_lg_3: 25342979-25356224 Lactuca sativa
Lsat_1_v5_gn_3_18820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 25342979-25347978 Lactuca sativa
Lsat_1_v5_gn_3_18820 5.0kb downstream 5.0kb downstream 13246   true Lsat_1_v8_lg_3: 25347979-25361224 Lactuca sativa
Lsat_1_v5_gn_3_18820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 25356225-25361224 Lactuca sativa
Lsat_1_v5_gn_3_18820 10.0kb upstream 10.0kb upstream 18246   true Lsat_1_v8_lg_3: 25337979-25356224 Lactuca sativa
Lsat_1_v5_gn_3_18820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 25337979-25347978 Lactuca sativa
Lsat_1_v5_gn_3_18820 10.0kb downstream 10.0kb downstream 18246   true Lsat_1_v8_lg_3: 25347979-25366224 Lactuca sativa
Lsat_1_v5_gn_3_18820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 25356225-25366224 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474354 5263 Asterids View MSA
123740508 5271 Pentapetalae View MSA
122789191 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain