Gene : Lsat_1_v5_gn_3_19241 L. sativa V8
Defline:  (1 of 4) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  575
Name:  ? Lsat_1_v5_gn_3_19241 Secondary Identifier:  ? PAC:38920670
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_19241 0.5kb upstream 0.5kb upstream 3324   true Lsat_1_v8_lg_3: 26573260-26576583 Lactuca sativa
Lsat_1_v5_gn_3_19241 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 26576084-26576583 Lactuca sativa
Lsat_1_v5_gn_3_19241 0.5kb downstream 0.5kb downstream 3324   true Lsat_1_v8_lg_3: 26572760-26576083 Lactuca sativa
Lsat_1_v5_gn_3_19241 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 26572760-26573259 Lactuca sativa
Lsat_1_v5_gn_3_19241 1.0kb upstream 1.0kb upstream 3824   true Lsat_1_v8_lg_3: 26573260-26577083 Lactuca sativa
Lsat_1_v5_gn_3_19241 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 26576084-26577083 Lactuca sativa
Lsat_1_v5_gn_3_19241 1.0kb downstream 1.0kb downstream 3824   true Lsat_1_v8_lg_3: 26572260-26576083 Lactuca sativa
Lsat_1_v5_gn_3_19241 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 26572260-26573259 Lactuca sativa
Lsat_1_v5_gn_3_19241 2.0kb upstream 2.0kb upstream 4824   true Lsat_1_v8_lg_3: 26573260-26578083 Lactuca sativa
Lsat_1_v5_gn_3_19241 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 26576084-26578083 Lactuca sativa
Lsat_1_v5_gn_3_19241 2.0kb downstream 2.0kb downstream 4824   true Lsat_1_v8_lg_3: 26571260-26576083 Lactuca sativa
Lsat_1_v5_gn_3_19241 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 26571260-26573259 Lactuca sativa
Lsat_1_v5_gn_3_19241 5.0kb upstream 5.0kb upstream 7824   true Lsat_1_v8_lg_3: 26573260-26581083 Lactuca sativa
Lsat_1_v5_gn_3_19241 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 26576084-26581083 Lactuca sativa
Lsat_1_v5_gn_3_19241 5.0kb downstream 5.0kb downstream 7824   true Lsat_1_v8_lg_3: 26568260-26576083 Lactuca sativa
Lsat_1_v5_gn_3_19241 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 26568260-26573259 Lactuca sativa
Lsat_1_v5_gn_3_19241 10.0kb upstream 10.0kb upstream 12824   true Lsat_1_v8_lg_3: 26573260-26586083 Lactuca sativa
Lsat_1_v5_gn_3_19241 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 26576084-26586083 Lactuca sativa
Lsat_1_v5_gn_3_19241 10.0kb downstream 10.0kb downstream 12824   true Lsat_1_v8_lg_3: 26563260-26576083 Lactuca sativa
Lsat_1_v5_gn_3_19241 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 26563260-26573259 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472401 5263 Asterids View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain