Gene : Lsat_1_v5_gn_3_19620 L. sativa V8
Defline:  (1 of 1) K09658 - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2) Genomic Order:  580
Name:  ? Lsat_1_v5_gn_3_19620 Secondary Identifier:  ? PAC:38915719
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_19620 0.5kb upstream 0.5kb upstream 2177   true Lsat_1_v8_lg_3: 26676807-26678983 Lactuca sativa
Lsat_1_v5_gn_3_19620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 26678484-26678983 Lactuca sativa
Lsat_1_v5_gn_3_19620 0.5kb downstream 0.5kb downstream 2177   true Lsat_1_v8_lg_3: 26676307-26678483 Lactuca sativa
Lsat_1_v5_gn_3_19620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 26676307-26676806 Lactuca sativa
Lsat_1_v5_gn_3_19620 1.0kb upstream 1.0kb upstream 2677   true Lsat_1_v8_lg_3: 26676807-26679483 Lactuca sativa
Lsat_1_v5_gn_3_19620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 26678484-26679483 Lactuca sativa
Lsat_1_v5_gn_3_19620 1.0kb downstream 1.0kb downstream 2677   true Lsat_1_v8_lg_3: 26675807-26678483 Lactuca sativa
Lsat_1_v5_gn_3_19620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 26675807-26676806 Lactuca sativa
Lsat_1_v5_gn_3_19620 2.0kb upstream 2.0kb upstream 3677   true Lsat_1_v8_lg_3: 26676807-26680483 Lactuca sativa
Lsat_1_v5_gn_3_19620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 26678484-26680483 Lactuca sativa
Lsat_1_v5_gn_3_19620 2.0kb downstream 2.0kb downstream 3677   true Lsat_1_v8_lg_3: 26674807-26678483 Lactuca sativa
Lsat_1_v5_gn_3_19620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 26674807-26676806 Lactuca sativa
Lsat_1_v5_gn_3_19620 5.0kb upstream 5.0kb upstream 6677   true Lsat_1_v8_lg_3: 26676807-26683483 Lactuca sativa
Lsat_1_v5_gn_3_19620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 26678484-26683483 Lactuca sativa
Lsat_1_v5_gn_3_19620 5.0kb downstream 5.0kb downstream 6677   true Lsat_1_v8_lg_3: 26671807-26678483 Lactuca sativa
Lsat_1_v5_gn_3_19620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 26671807-26676806 Lactuca sativa
Lsat_1_v5_gn_3_19620 10.0kb upstream 10.0kb upstream 11677   true Lsat_1_v8_lg_3: 26676807-26688483 Lactuca sativa
Lsat_1_v5_gn_3_19620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 26678484-26688483 Lactuca sativa
Lsat_1_v5_gn_3_19620 10.0kb downstream 10.0kb downstream 11677   true Lsat_1_v8_lg_3: 26666807-26678483 Lactuca sativa
Lsat_1_v5_gn_3_19620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 26666807-26676806 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471944 5263 Asterids View MSA
123741974 5271 Pentapetalae View MSA
122794154 5272 Eudicot View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain