Gene : Lsat_1_v5_gn_3_19441 L. sativa V8
Defline:  (1 of 1) PTHR11717//PTHR11717:SF2 - LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE // PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED Genomic Order:  587
Name:  ? Lsat_1_v5_gn_3_19441 Secondary Identifier:  ? PAC:38918372
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_19441 0.5kb upstream 0.5kb upstream 1915   true Lsat_1_v8_lg_3: 26756036-26757950 Lactuca sativa
Lsat_1_v5_gn_3_19441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 26756036-26756535 Lactuca sativa
Lsat_1_v5_gn_3_19441 0.5kb downstream 0.5kb downstream 1915   true Lsat_1_v8_lg_3: 26756536-26758450 Lactuca sativa
Lsat_1_v5_gn_3_19441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 26757951-26758450 Lactuca sativa
Lsat_1_v5_gn_3_19441 1.0kb upstream 1.0kb upstream 2415   true Lsat_1_v8_lg_3: 26755536-26757950 Lactuca sativa
Lsat_1_v5_gn_3_19441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 26755536-26756535 Lactuca sativa
Lsat_1_v5_gn_3_19441 1.0kb downstream 1.0kb downstream 2415   true Lsat_1_v8_lg_3: 26756536-26758950 Lactuca sativa
Lsat_1_v5_gn_3_19441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 26757951-26758950 Lactuca sativa
Lsat_1_v5_gn_3_19441 2.0kb upstream 2.0kb upstream 3415   true Lsat_1_v8_lg_3: 26754536-26757950 Lactuca sativa
Lsat_1_v5_gn_3_19441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 26754536-26756535 Lactuca sativa
Lsat_1_v5_gn_3_19441 2.0kb downstream 2.0kb downstream 3415   true Lsat_1_v8_lg_3: 26756536-26759950 Lactuca sativa
Lsat_1_v5_gn_3_19441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 26757951-26759950 Lactuca sativa
Lsat_1_v5_gn_3_19441 5.0kb upstream 5.0kb upstream 6415   true Lsat_1_v8_lg_3: 26751536-26757950 Lactuca sativa
Lsat_1_v5_gn_3_19441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 26751536-26756535 Lactuca sativa
Lsat_1_v5_gn_3_19441 5.0kb downstream 5.0kb downstream 6415   true Lsat_1_v8_lg_3: 26756536-26762950 Lactuca sativa
Lsat_1_v5_gn_3_19441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 26757951-26762950 Lactuca sativa
Lsat_1_v5_gn_3_19441 10.0kb upstream 10.0kb upstream 11415   true Lsat_1_v8_lg_3: 26746536-26757950 Lactuca sativa
Lsat_1_v5_gn_3_19441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 26746536-26756535 Lactuca sativa
Lsat_1_v5_gn_3_19441 10.0kb downstream 10.0kb downstream 11415   true Lsat_1_v8_lg_3: 26756536-26767950 Lactuca sativa
Lsat_1_v5_gn_3_19441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 26757951-26767950 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481675 5263 Asterids View MSA
123751866 5271 Pentapetalae View MSA
122787633 5272 Eudicot View MSA
122042660 5273 Angiosperm View MSA
121347081 5274 Embryophyte View MSA
123425673 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain