Gene : Lsat_1_v5_gn_3_20841 L. sativa V8
Defline:  (1 of 1) PTHR31499:SF5 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  597
Name:  ? Lsat_1_v5_gn_3_20841 Secondary Identifier:  ? PAC:38920280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_20841 0.5kb upstream 0.5kb upstream 3479   true Lsat_1_v8_lg_3: 27137331-27140809 Lactuca sativa
Lsat_1_v5_gn_3_20841 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 27140310-27140809 Lactuca sativa
Lsat_1_v5_gn_3_20841 0.5kb downstream 0.5kb downstream 3479   true Lsat_1_v8_lg_3: 27136831-27140309 Lactuca sativa
Lsat_1_v5_gn_3_20841 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 27136831-27137330 Lactuca sativa
Lsat_1_v5_gn_3_20841 1.0kb upstream 1.0kb upstream 3979   true Lsat_1_v8_lg_3: 27137331-27141309 Lactuca sativa
Lsat_1_v5_gn_3_20841 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 27140310-27141309 Lactuca sativa
Lsat_1_v5_gn_3_20841 1.0kb downstream 1.0kb downstream 3979   true Lsat_1_v8_lg_3: 27136331-27140309 Lactuca sativa
Lsat_1_v5_gn_3_20841 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 27136331-27137330 Lactuca sativa
Lsat_1_v5_gn_3_20841 2.0kb upstream 2.0kb upstream 4979   true Lsat_1_v8_lg_3: 27137331-27142309 Lactuca sativa
Lsat_1_v5_gn_3_20841 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 27140310-27142309 Lactuca sativa
Lsat_1_v5_gn_3_20841 2.0kb downstream 2.0kb downstream 4979   true Lsat_1_v8_lg_3: 27135331-27140309 Lactuca sativa
Lsat_1_v5_gn_3_20841 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 27135331-27137330 Lactuca sativa
Lsat_1_v5_gn_3_20841 5.0kb upstream 5.0kb upstream 7979   true Lsat_1_v8_lg_3: 27137331-27145309 Lactuca sativa
Lsat_1_v5_gn_3_20841 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 27140310-27145309 Lactuca sativa
Lsat_1_v5_gn_3_20841 5.0kb downstream 5.0kb downstream 7979   true Lsat_1_v8_lg_3: 27132331-27140309 Lactuca sativa
Lsat_1_v5_gn_3_20841 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 27132331-27137330 Lactuca sativa
Lsat_1_v5_gn_3_20841 10.0kb upstream 10.0kb upstream 12979   true Lsat_1_v8_lg_3: 27137331-27150309 Lactuca sativa
Lsat_1_v5_gn_3_20841 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 27140310-27150309 Lactuca sativa
Lsat_1_v5_gn_3_20841 10.0kb downstream 10.0kb downstream 12979   true Lsat_1_v8_lg_3: 27127331-27140309 Lactuca sativa
Lsat_1_v5_gn_3_20841 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 27127331-27137330 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475431 5263 Asterids View MSA
123741048 5271 Pentapetalae View MSA
122787904 5272 Eudicot View MSA
122042666 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain