Gene : Lsat_1_v5_gn_3_20780 L. sativa V8
Defline:  (1 of 4) PTHR24078//PTHR24078:SF193 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HOMOLOG SUBFAMILY C MEMBER 2 Genomic Order:  594
Name:  ? Lsat_1_v5_gn_3_20780 Secondary Identifier:  ? PAC:38920972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_20780 0.5kb upstream 0.5kb upstream 2461   true Lsat_1_v8_lg_3: 27056018-27058478 Lactuca sativa
Lsat_1_v5_gn_3_20780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 27056018-27056517 Lactuca sativa
Lsat_1_v5_gn_3_20780 0.5kb downstream 0.5kb downstream 2461   true Lsat_1_v8_lg_3: 27056518-27058978 Lactuca sativa
Lsat_1_v5_gn_3_20780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 27058479-27058978 Lactuca sativa
Lsat_1_v5_gn_3_20780 1.0kb upstream 1.0kb upstream 2961   true Lsat_1_v8_lg_3: 27055518-27058478 Lactuca sativa
Lsat_1_v5_gn_3_20780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 27055518-27056517 Lactuca sativa
Lsat_1_v5_gn_3_20780 1.0kb downstream 1.0kb downstream 2961   true Lsat_1_v8_lg_3: 27056518-27059478 Lactuca sativa
Lsat_1_v5_gn_3_20780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 27058479-27059478 Lactuca sativa
Lsat_1_v5_gn_3_20780 2.0kb upstream 2.0kb upstream 3961   true Lsat_1_v8_lg_3: 27054518-27058478 Lactuca sativa
Lsat_1_v5_gn_3_20780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 27054518-27056517 Lactuca sativa
Lsat_1_v5_gn_3_20780 2.0kb downstream 2.0kb downstream 3961   true Lsat_1_v8_lg_3: 27056518-27060478 Lactuca sativa
Lsat_1_v5_gn_3_20780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 27058479-27060478 Lactuca sativa
Lsat_1_v5_gn_3_20780 5.0kb upstream 5.0kb upstream 6961   true Lsat_1_v8_lg_3: 27051518-27058478 Lactuca sativa
Lsat_1_v5_gn_3_20780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 27051518-27056517 Lactuca sativa
Lsat_1_v5_gn_3_20780 5.0kb downstream 5.0kb downstream 6961   true Lsat_1_v8_lg_3: 27056518-27063478 Lactuca sativa
Lsat_1_v5_gn_3_20780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 27058479-27063478 Lactuca sativa
Lsat_1_v5_gn_3_20780 10.0kb upstream 10.0kb upstream 11961   true Lsat_1_v8_lg_3: 27046518-27058478 Lactuca sativa
Lsat_1_v5_gn_3_20780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 27046518-27056517 Lactuca sativa
Lsat_1_v5_gn_3_20780 10.0kb downstream 10.0kb downstream 11961   true Lsat_1_v8_lg_3: 27056518-27068478 Lactuca sativa
Lsat_1_v5_gn_3_20780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 27058479-27068478 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481779 5263 Asterids View MSA
123753293 5271 Pentapetalae View MSA
122794743 5272 Eudicot View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain