Gene : Lsat_1_v5_gn_3_2200 L. sativa V8
Defline:  (1 of 4) PTHR31374//PTHR31374:SF56 - FAMILY NOT NAMED // AUXIN-REGULATED PROTEIN-RELATED Genomic Order:  59
Name:  ? Lsat_1_v5_gn_3_2200 Secondary Identifier:  ? PAC:38918894
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_2200 0.5kb upstream 0.5kb upstream 1364   true Lsat_1_v8_lg_3: 4498082-4499445 Lactuca sativa
Lsat_1_v5_gn_3_2200 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 4498082-4498581 Lactuca sativa
Lsat_1_v5_gn_3_2200 0.5kb downstream 0.5kb downstream 1364   true Lsat_1_v8_lg_3: 4498582-4499945 Lactuca sativa
Lsat_1_v5_gn_3_2200 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 4499446-4499945 Lactuca sativa
Lsat_1_v5_gn_3_2200 1.0kb upstream 1.0kb upstream 1864   true Lsat_1_v8_lg_3: 4497582-4499445 Lactuca sativa
Lsat_1_v5_gn_3_2200 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 4497582-4498581 Lactuca sativa
Lsat_1_v5_gn_3_2200 1.0kb downstream 1.0kb downstream 1864   true Lsat_1_v8_lg_3: 4498582-4500445 Lactuca sativa
Lsat_1_v5_gn_3_2200 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 4499446-4500445 Lactuca sativa
Lsat_1_v5_gn_3_2200 2.0kb upstream 2.0kb upstream 2864   true Lsat_1_v8_lg_3: 4496582-4499445 Lactuca sativa
Lsat_1_v5_gn_3_2200 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 4496582-4498581 Lactuca sativa
Lsat_1_v5_gn_3_2200 2.0kb downstream 2.0kb downstream 2864   true Lsat_1_v8_lg_3: 4498582-4501445 Lactuca sativa
Lsat_1_v5_gn_3_2200 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 4499446-4501445 Lactuca sativa
Lsat_1_v5_gn_3_2200 5.0kb upstream 5.0kb upstream 5864   true Lsat_1_v8_lg_3: 4493582-4499445 Lactuca sativa
Lsat_1_v5_gn_3_2200 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 4493582-4498581 Lactuca sativa
Lsat_1_v5_gn_3_2200 5.0kb downstream 5.0kb downstream 5864   true Lsat_1_v8_lg_3: 4498582-4504445 Lactuca sativa
Lsat_1_v5_gn_3_2200 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 4499446-4504445 Lactuca sativa
Lsat_1_v5_gn_3_2200 10.0kb upstream 10.0kb upstream 10864   true Lsat_1_v8_lg_3: 4488582-4499445 Lactuca sativa
Lsat_1_v5_gn_3_2200 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 4488582-4498581 Lactuca sativa
Lsat_1_v5_gn_3_2200 10.0kb downstream 10.0kb downstream 10864   true Lsat_1_v8_lg_3: 4498582-4509445 Lactuca sativa
Lsat_1_v5_gn_3_2200 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 4499446-4509445 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479015 5263 Asterids View MSA
123741344 5271 Pentapetalae View MSA
122791593 5272 Eudicot View MSA
122049926 5273 Angiosperm View MSA
121311651 5274 Embryophyte View MSA
123348921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain