Gene : Lsat_1_v5_gn_3_22340 L. sativa V8
Defline:  (1 of 9) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  683
Name:  ? Lsat_1_v5_gn_3_22340 Secondary Identifier:  ? PAC:38919753
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_22340 0.5kb upstream 0.5kb upstream 1820   true Lsat_1_v8_lg_3: 30798595-30800414 Lactuca sativa
Lsat_1_v5_gn_3_22340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 30799915-30800414 Lactuca sativa
Lsat_1_v5_gn_3_22340 0.5kb downstream 0.5kb downstream 1820   true Lsat_1_v8_lg_3: 30798095-30799914 Lactuca sativa
Lsat_1_v5_gn_3_22340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 30798095-30798594 Lactuca sativa
Lsat_1_v5_gn_3_22340 1.0kb upstream 1.0kb upstream 2320   true Lsat_1_v8_lg_3: 30798595-30800914 Lactuca sativa
Lsat_1_v5_gn_3_22340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 30799915-30800914 Lactuca sativa
Lsat_1_v5_gn_3_22340 1.0kb downstream 1.0kb downstream 2320   true Lsat_1_v8_lg_3: 30797595-30799914 Lactuca sativa
Lsat_1_v5_gn_3_22340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 30797595-30798594 Lactuca sativa
Lsat_1_v5_gn_3_22340 2.0kb upstream 2.0kb upstream 3320   true Lsat_1_v8_lg_3: 30798595-30801914 Lactuca sativa
Lsat_1_v5_gn_3_22340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 30799915-30801914 Lactuca sativa
Lsat_1_v5_gn_3_22340 2.0kb downstream 2.0kb downstream 3320   true Lsat_1_v8_lg_3: 30796595-30799914 Lactuca sativa
Lsat_1_v5_gn_3_22340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 30796595-30798594 Lactuca sativa
Lsat_1_v5_gn_3_22340 5.0kb upstream 5.0kb upstream 6320   true Lsat_1_v8_lg_3: 30798595-30804914 Lactuca sativa
Lsat_1_v5_gn_3_22340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 30799915-30804914 Lactuca sativa
Lsat_1_v5_gn_3_22340 5.0kb downstream 5.0kb downstream 6320   true Lsat_1_v8_lg_3: 30793595-30799914 Lactuca sativa
Lsat_1_v5_gn_3_22340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 30793595-30798594 Lactuca sativa
Lsat_1_v5_gn_3_22340 10.0kb upstream 10.0kb upstream 11320   true Lsat_1_v8_lg_3: 30798595-30809914 Lactuca sativa
Lsat_1_v5_gn_3_22340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 30799915-30809914 Lactuca sativa
Lsat_1_v5_gn_3_22340 10.0kb downstream 10.0kb downstream 11320   true Lsat_1_v8_lg_3: 30788595-30799914 Lactuca sativa
Lsat_1_v5_gn_3_22340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 30788595-30798594 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477384 5263 Asterids View MSA
123747473 5271 Pentapetalae View MSA
122794645 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain