Gene : Lsat_1_v5_gn_3_23880 L. sativa V8
Defline:  (1 of 2) K09494 - T-complex protein 1 subunit beta (CCT2) Genomic Order:  736
Name:  ? Lsat_1_v5_gn_3_23880 Secondary Identifier:  ? PAC:38921418
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_23880 0.5kb upstream 0.5kb upstream 4296   true Lsat_1_v8_lg_3: 33147833-33152128 Lactuca sativa
Lsat_1_v5_gn_3_23880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 33147833-33148332 Lactuca sativa
Lsat_1_v5_gn_3_23880 0.5kb downstream 0.5kb downstream 4296   true Lsat_1_v8_lg_3: 33148333-33152628 Lactuca sativa
Lsat_1_v5_gn_3_23880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 33152129-33152628 Lactuca sativa
Lsat_1_v5_gn_3_23880 1.0kb upstream 1.0kb upstream 4796   true Lsat_1_v8_lg_3: 33147333-33152128 Lactuca sativa
Lsat_1_v5_gn_3_23880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 33147333-33148332 Lactuca sativa
Lsat_1_v5_gn_3_23880 1.0kb downstream 1.0kb downstream 4796   true Lsat_1_v8_lg_3: 33148333-33153128 Lactuca sativa
Lsat_1_v5_gn_3_23880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 33152129-33153128 Lactuca sativa
Lsat_1_v5_gn_3_23880 2.0kb upstream 2.0kb upstream 5796   true Lsat_1_v8_lg_3: 33146333-33152128 Lactuca sativa
Lsat_1_v5_gn_3_23880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 33146333-33148332 Lactuca sativa
Lsat_1_v5_gn_3_23880 2.0kb downstream 2.0kb downstream 5796   true Lsat_1_v8_lg_3: 33148333-33154128 Lactuca sativa
Lsat_1_v5_gn_3_23880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 33152129-33154128 Lactuca sativa
Lsat_1_v5_gn_3_23880 5.0kb upstream 5.0kb upstream 8796   true Lsat_1_v8_lg_3: 33143333-33152128 Lactuca sativa
Lsat_1_v5_gn_3_23880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 33143333-33148332 Lactuca sativa
Lsat_1_v5_gn_3_23880 5.0kb downstream 5.0kb downstream 8796   true Lsat_1_v8_lg_3: 33148333-33157128 Lactuca sativa
Lsat_1_v5_gn_3_23880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 33152129-33157128 Lactuca sativa
Lsat_1_v5_gn_3_23880 10.0kb upstream 10.0kb upstream 13796   true Lsat_1_v8_lg_3: 33138333-33152128 Lactuca sativa
Lsat_1_v5_gn_3_23880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 33138333-33148332 Lactuca sativa
Lsat_1_v5_gn_3_23880 10.0kb downstream 10.0kb downstream 13796   true Lsat_1_v8_lg_3: 33148333-33162128 Lactuca sativa
Lsat_1_v5_gn_3_23880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 33152129-33162128 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473751 5263 Asterids View MSA
123747286 5271 Pentapetalae View MSA
122790745 5272 Eudicot View MSA
122042218 5273 Angiosperm View MSA
121346616 5274 Embryophyte View MSA
123426772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain