Gene : Lsat_1_v5_gn_3_23181 L. sativa V8
Defline:  (1 of 6) PTHR11785//PTHR11785:SF355 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  652
Name:  ? Lsat_1_v5_gn_3_23181 Secondary Identifier:  ? PAC:38917850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_23181 0.5kb upstream 0.5kb upstream 7560   true Lsat_1_v8_lg_3: 30254529-30262088 Lactuca sativa
Lsat_1_v5_gn_3_23181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 30254529-30255028 Lactuca sativa
Lsat_1_v5_gn_3_23181 0.5kb downstream 0.5kb downstream 7560   true Lsat_1_v8_lg_3: 30255029-30262588 Lactuca sativa
Lsat_1_v5_gn_3_23181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 30262089-30262588 Lactuca sativa
Lsat_1_v5_gn_3_23181 1.0kb upstream 1.0kb upstream 8060   true Lsat_1_v8_lg_3: 30254029-30262088 Lactuca sativa
Lsat_1_v5_gn_3_23181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 30254029-30255028 Lactuca sativa
Lsat_1_v5_gn_3_23181 1.0kb downstream 1.0kb downstream 8060   true Lsat_1_v8_lg_3: 30255029-30263088 Lactuca sativa
Lsat_1_v5_gn_3_23181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 30262089-30263088 Lactuca sativa
Lsat_1_v5_gn_3_23181 2.0kb upstream 2.0kb upstream 9060   true Lsat_1_v8_lg_3: 30253029-30262088 Lactuca sativa
Lsat_1_v5_gn_3_23181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 30253029-30255028 Lactuca sativa
Lsat_1_v5_gn_3_23181 2.0kb downstream 2.0kb downstream 9060   true Lsat_1_v8_lg_3: 30255029-30264088 Lactuca sativa
Lsat_1_v5_gn_3_23181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 30262089-30264088 Lactuca sativa
Lsat_1_v5_gn_3_23181 5.0kb upstream 5.0kb upstream 12060   true Lsat_1_v8_lg_3: 30250029-30262088 Lactuca sativa
Lsat_1_v5_gn_3_23181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 30250029-30255028 Lactuca sativa
Lsat_1_v5_gn_3_23181 5.0kb downstream 5.0kb downstream 12060   true Lsat_1_v8_lg_3: 30255029-30267088 Lactuca sativa
Lsat_1_v5_gn_3_23181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 30262089-30267088 Lactuca sativa
Lsat_1_v5_gn_3_23181 10.0kb upstream 10.0kb upstream 17060   true Lsat_1_v8_lg_3: 30245029-30262088 Lactuca sativa
Lsat_1_v5_gn_3_23181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 30245029-30255028 Lactuca sativa
Lsat_1_v5_gn_3_23181 10.0kb downstream 10.0kb downstream 17060   true Lsat_1_v8_lg_3: 30255029-30272088 Lactuca sativa
Lsat_1_v5_gn_3_23181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 30262089-30272088 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473970 5263 Asterids View MSA
123742789 5271 Pentapetalae View MSA
122791655 5272 Eudicot View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain