Gene : Lsat_1_v5_gn_3_23460 L. sativa V8
Defline:  (1 of 1) K03025 - DNA-directed RNA polymerase III subunit RPC6 (RPC6, POLR3F) Genomic Order:  641
Name:  ? Lsat_1_v5_gn_3_23460 Secondary Identifier:  ? PAC:38921407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_23460 0.5kb upstream 0.5kb upstream 3619   true Lsat_1_v8_lg_3: 29989343-29992961 Lactuca sativa
Lsat_1_v5_gn_3_23460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 29992462-29992961 Lactuca sativa
Lsat_1_v5_gn_3_23460 0.5kb downstream 0.5kb downstream 3619   true Lsat_1_v8_lg_3: 29988843-29992461 Lactuca sativa
Lsat_1_v5_gn_3_23460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 29988843-29989342 Lactuca sativa
Lsat_1_v5_gn_3_23460 1.0kb upstream 1.0kb upstream 4119   true Lsat_1_v8_lg_3: 29989343-29993461 Lactuca sativa
Lsat_1_v5_gn_3_23460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 29992462-29993461 Lactuca sativa
Lsat_1_v5_gn_3_23460 1.0kb downstream 1.0kb downstream 4119   true Lsat_1_v8_lg_3: 29988343-29992461 Lactuca sativa
Lsat_1_v5_gn_3_23460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 29988343-29989342 Lactuca sativa
Lsat_1_v5_gn_3_23460 2.0kb upstream 2.0kb upstream 5119   true Lsat_1_v8_lg_3: 29989343-29994461 Lactuca sativa
Lsat_1_v5_gn_3_23460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 29992462-29994461 Lactuca sativa
Lsat_1_v5_gn_3_23460 2.0kb downstream 2.0kb downstream 5119   true Lsat_1_v8_lg_3: 29987343-29992461 Lactuca sativa
Lsat_1_v5_gn_3_23460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 29987343-29989342 Lactuca sativa
Lsat_1_v5_gn_3_23460 5.0kb upstream 5.0kb upstream 8119   true Lsat_1_v8_lg_3: 29989343-29997461 Lactuca sativa
Lsat_1_v5_gn_3_23460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 29992462-29997461 Lactuca sativa
Lsat_1_v5_gn_3_23460 5.0kb downstream 5.0kb downstream 8119   true Lsat_1_v8_lg_3: 29984343-29992461 Lactuca sativa
Lsat_1_v5_gn_3_23460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 29984343-29989342 Lactuca sativa
Lsat_1_v5_gn_3_23460 10.0kb upstream 10.0kb upstream 13119   true Lsat_1_v8_lg_3: 29989343-30002461 Lactuca sativa
Lsat_1_v5_gn_3_23460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 29992462-30002461 Lactuca sativa
Lsat_1_v5_gn_3_23460 10.0kb downstream 10.0kb downstream 13119   true Lsat_1_v8_lg_3: 29979343-29992461 Lactuca sativa
Lsat_1_v5_gn_3_23460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 29979343-29989342 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479425 5263 Asterids View MSA
123744384 5271 Pentapetalae View MSA
122788690 5272 Eudicot View MSA
122046766 5273 Angiosperm View MSA
121344415 5274 Embryophyte View MSA
123425900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain