Gene : Lsat_1_v5_gn_3_24601 L. sativa V8
Defline:  (1 of 7) KOG1003 - Actin filament-coating protein tropomyosin Genomic Order:  766
Name:  ? Lsat_1_v5_gn_3_24601 Secondary Identifier:  ? PAC:38917515
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_24601 0.5kb upstream 0.5kb upstream 4321   true Lsat_1_v8_lg_3: 33851364-33855684 Lactuca sativa
Lsat_1_v5_gn_3_24601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 33851364-33851863 Lactuca sativa
Lsat_1_v5_gn_3_24601 0.5kb downstream 0.5kb downstream 4321   true Lsat_1_v8_lg_3: 33851864-33856184 Lactuca sativa
Lsat_1_v5_gn_3_24601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 33855685-33856184 Lactuca sativa
Lsat_1_v5_gn_3_24601 1.0kb upstream 1.0kb upstream 4821   true Lsat_1_v8_lg_3: 33850864-33855684 Lactuca sativa
Lsat_1_v5_gn_3_24601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 33850864-33851863 Lactuca sativa
Lsat_1_v5_gn_3_24601 1.0kb downstream 1.0kb downstream 4821   true Lsat_1_v8_lg_3: 33851864-33856684 Lactuca sativa
Lsat_1_v5_gn_3_24601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 33855685-33856684 Lactuca sativa
Lsat_1_v5_gn_3_24601 2.0kb upstream 2.0kb upstream 5821   true Lsat_1_v8_lg_3: 33849864-33855684 Lactuca sativa
Lsat_1_v5_gn_3_24601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 33849864-33851863 Lactuca sativa
Lsat_1_v5_gn_3_24601 2.0kb downstream 2.0kb downstream 5821   true Lsat_1_v8_lg_3: 33851864-33857684 Lactuca sativa
Lsat_1_v5_gn_3_24601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 33855685-33857684 Lactuca sativa
Lsat_1_v5_gn_3_24601 5.0kb upstream 5.0kb upstream 8821   true Lsat_1_v8_lg_3: 33846864-33855684 Lactuca sativa
Lsat_1_v5_gn_3_24601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 33846864-33851863 Lactuca sativa
Lsat_1_v5_gn_3_24601 5.0kb downstream 5.0kb downstream 8821   true Lsat_1_v8_lg_3: 33851864-33860684 Lactuca sativa
Lsat_1_v5_gn_3_24601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 33855685-33860684 Lactuca sativa
Lsat_1_v5_gn_3_24601 10.0kb upstream 10.0kb upstream 13821   true Lsat_1_v8_lg_3: 33841864-33855684 Lactuca sativa
Lsat_1_v5_gn_3_24601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 33841864-33851863 Lactuca sativa
Lsat_1_v5_gn_3_24601 10.0kb downstream 10.0kb downstream 13821   true Lsat_1_v8_lg_3: 33851864-33865684 Lactuca sativa
Lsat_1_v5_gn_3_24601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 33855685-33865684 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481018 5263 Asterids View MSA
123740440 5271 Pentapetalae View MSA
122788367 5272 Eudicot View MSA
122044616 5273 Angiosperm View MSA
121349321 5274 Embryophyte View MSA
123381277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain