Gene : Lsat_1_v5_gn_3_25061 L. sativa V8
Defline:  (1 of 1) PTHR24089//PTHR24089:SF342 - FAMILY NOT NAMED // PROTEIN R07E3.4 Genomic Order:  747
Name:  ? Lsat_1_v5_gn_3_25061 Secondary Identifier:  ? PAC:38916459
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_25061 0.5kb upstream 0.5kb upstream 3657   true Lsat_1_v8_lg_3: 33398930-33402586 Lactuca sativa
Lsat_1_v5_gn_3_25061 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 33398930-33399429 Lactuca sativa
Lsat_1_v5_gn_3_25061 0.5kb downstream 0.5kb downstream 3657   true Lsat_1_v8_lg_3: 33399430-33403086 Lactuca sativa
Lsat_1_v5_gn_3_25061 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 33402587-33403086 Lactuca sativa
Lsat_1_v5_gn_3_25061 1.0kb upstream 1.0kb upstream 4157   true Lsat_1_v8_lg_3: 33398430-33402586 Lactuca sativa
Lsat_1_v5_gn_3_25061 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 33398430-33399429 Lactuca sativa
Lsat_1_v5_gn_3_25061 1.0kb downstream 1.0kb downstream 4157   true Lsat_1_v8_lg_3: 33399430-33403586 Lactuca sativa
Lsat_1_v5_gn_3_25061 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 33402587-33403586 Lactuca sativa
Lsat_1_v5_gn_3_25061 2.0kb upstream 2.0kb upstream 5157   true Lsat_1_v8_lg_3: 33397430-33402586 Lactuca sativa
Lsat_1_v5_gn_3_25061 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 33397430-33399429 Lactuca sativa
Lsat_1_v5_gn_3_25061 2.0kb downstream 2.0kb downstream 5157   true Lsat_1_v8_lg_3: 33399430-33404586 Lactuca sativa
Lsat_1_v5_gn_3_25061 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 33402587-33404586 Lactuca sativa
Lsat_1_v5_gn_3_25061 5.0kb upstream 5.0kb upstream 8157   true Lsat_1_v8_lg_3: 33394430-33402586 Lactuca sativa
Lsat_1_v5_gn_3_25061 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 33394430-33399429 Lactuca sativa
Lsat_1_v5_gn_3_25061 5.0kb downstream 5.0kb downstream 8157   true Lsat_1_v8_lg_3: 33399430-33407586 Lactuca sativa
Lsat_1_v5_gn_3_25061 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 33402587-33407586 Lactuca sativa
Lsat_1_v5_gn_3_25061 10.0kb upstream 10.0kb upstream 13157   true Lsat_1_v8_lg_3: 33389430-33402586 Lactuca sativa
Lsat_1_v5_gn_3_25061 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 33389430-33399429 Lactuca sativa
Lsat_1_v5_gn_3_25061 10.0kb downstream 10.0kb downstream 13157   true Lsat_1_v8_lg_3: 33399430-33412586 Lactuca sativa
Lsat_1_v5_gn_3_25061 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 33402587-33412586 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468650 5263 Asterids View MSA
123737630 5271 Pentapetalae View MSA
122792945 5272 Eudicot View MSA
122042720 5273 Angiosperm View MSA
121346256 5274 Embryophyte View MSA
123427851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain