Gene : Lsat_1_v5_gn_3_25381 L. sativa V8
Defline:  (1 of 8) PF07839 - Plant calmodulin-binding domain (CaM_binding) Genomic Order:  780
Name:  ? Lsat_1_v5_gn_3_25381 Secondary Identifier:  ? PAC:38921464
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_25381 0.5kb upstream 0.5kb upstream 2277   true Lsat_1_v8_lg_3: 34170481-34172757 Lactuca sativa
Lsat_1_v5_gn_3_25381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 34170481-34170980 Lactuca sativa
Lsat_1_v5_gn_3_25381 0.5kb downstream 0.5kb downstream 2277   true Lsat_1_v8_lg_3: 34170981-34173257 Lactuca sativa
Lsat_1_v5_gn_3_25381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 34172758-34173257 Lactuca sativa
Lsat_1_v5_gn_3_25381 1.0kb upstream 1.0kb upstream 2777   true Lsat_1_v8_lg_3: 34169981-34172757 Lactuca sativa
Lsat_1_v5_gn_3_25381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 34169981-34170980 Lactuca sativa
Lsat_1_v5_gn_3_25381 1.0kb downstream 1.0kb downstream 2777   true Lsat_1_v8_lg_3: 34170981-34173757 Lactuca sativa
Lsat_1_v5_gn_3_25381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 34172758-34173757 Lactuca sativa
Lsat_1_v5_gn_3_25381 2.0kb upstream 2.0kb upstream 3777   true Lsat_1_v8_lg_3: 34168981-34172757 Lactuca sativa
Lsat_1_v5_gn_3_25381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 34168981-34170980 Lactuca sativa
Lsat_1_v5_gn_3_25381 2.0kb downstream 2.0kb downstream 3777   true Lsat_1_v8_lg_3: 34170981-34174757 Lactuca sativa
Lsat_1_v5_gn_3_25381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 34172758-34174757 Lactuca sativa
Lsat_1_v5_gn_3_25381 5.0kb upstream 5.0kb upstream 6777   true Lsat_1_v8_lg_3: 34165981-34172757 Lactuca sativa
Lsat_1_v5_gn_3_25381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 34165981-34170980 Lactuca sativa
Lsat_1_v5_gn_3_25381 5.0kb downstream 5.0kb downstream 6777   true Lsat_1_v8_lg_3: 34170981-34177757 Lactuca sativa
Lsat_1_v5_gn_3_25381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 34172758-34177757 Lactuca sativa
Lsat_1_v5_gn_3_25381 10.0kb upstream 10.0kb upstream 11777   true Lsat_1_v8_lg_3: 34160981-34172757 Lactuca sativa
Lsat_1_v5_gn_3_25381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 34160981-34170980 Lactuca sativa
Lsat_1_v5_gn_3_25381 10.0kb downstream 10.0kb downstream 11777   true Lsat_1_v8_lg_3: 34170981-34182757 Lactuca sativa
Lsat_1_v5_gn_3_25381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 34172758-34182757 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467468 5263 Asterids View MSA
123738359 5271 Pentapetalae View MSA
122791450 5272 Eudicot View MSA
122049336 5273 Angiosperm View MSA
121311351 5274 Embryophyte View MSA
123348657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain