Gene : Lsat_1_v5_gn_3_27161 L. sativa V8
Defline:  (1 of 1) K02435 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C (gatC, GATC) Genomic Order:  818
Name:  ? Lsat_1_v5_gn_3_27161 Secondary Identifier:  ? PAC:38916727
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_27161 0.5kb upstream 0.5kb upstream 2925   true Lsat_1_v8_lg_3: 35624429-35627353 Lactuca sativa
Lsat_1_v5_gn_3_27161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 35624429-35624928 Lactuca sativa
Lsat_1_v5_gn_3_27161 0.5kb downstream 0.5kb downstream 2925   true Lsat_1_v8_lg_3: 35624929-35627853 Lactuca sativa
Lsat_1_v5_gn_3_27161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 35627354-35627853 Lactuca sativa
Lsat_1_v5_gn_3_27161 1.0kb upstream 1.0kb upstream 3425   true Lsat_1_v8_lg_3: 35623929-35627353 Lactuca sativa
Lsat_1_v5_gn_3_27161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 35623929-35624928 Lactuca sativa
Lsat_1_v5_gn_3_27161 1.0kb downstream 1.0kb downstream 3425   true Lsat_1_v8_lg_3: 35624929-35628353 Lactuca sativa
Lsat_1_v5_gn_3_27161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 35627354-35628353 Lactuca sativa
Lsat_1_v5_gn_3_27161 2.0kb upstream 2.0kb upstream 4425   true Lsat_1_v8_lg_3: 35622929-35627353 Lactuca sativa
Lsat_1_v5_gn_3_27161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 35622929-35624928 Lactuca sativa
Lsat_1_v5_gn_3_27161 2.0kb downstream 2.0kb downstream 4425   true Lsat_1_v8_lg_3: 35624929-35629353 Lactuca sativa
Lsat_1_v5_gn_3_27161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 35627354-35629353 Lactuca sativa
Lsat_1_v5_gn_3_27161 5.0kb upstream 5.0kb upstream 7425   true Lsat_1_v8_lg_3: 35619929-35627353 Lactuca sativa
Lsat_1_v5_gn_3_27161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 35619929-35624928 Lactuca sativa
Lsat_1_v5_gn_3_27161 5.0kb downstream 5.0kb downstream 7425   true Lsat_1_v8_lg_3: 35624929-35632353 Lactuca sativa
Lsat_1_v5_gn_3_27161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 35627354-35632353 Lactuca sativa
Lsat_1_v5_gn_3_27161 10.0kb upstream 10.0kb upstream 12425   true Lsat_1_v8_lg_3: 35614929-35627353 Lactuca sativa
Lsat_1_v5_gn_3_27161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 35614929-35624928 Lactuca sativa
Lsat_1_v5_gn_3_27161 10.0kb downstream 10.0kb downstream 12425   true Lsat_1_v8_lg_3: 35624929-35637353 Lactuca sativa
Lsat_1_v5_gn_3_27161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 35627354-35637353 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467437 5263 Asterids View MSA
123741294 5271 Pentapetalae View MSA
122794718 5272 Eudicot View MSA
122044892 5273 Angiosperm View MSA
121344912 5274 Embryophyte View MSA
123380128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain