Gene : Lsat_1_v5_gn_3_28001 L. sativa V8
Defline:  (1 of 1) K11247 - endophilin-A (SH3GL) Genomic Order:  846
Name:  ? Lsat_1_v5_gn_3_28001 Secondary Identifier:  ? PAC:38916030
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_28001 0.5kb upstream 0.5kb upstream 3102   true Lsat_1_v8_lg_3: 36357790-36360891 Lactuca sativa
Lsat_1_v5_gn_3_28001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 36360392-36360891 Lactuca sativa
Lsat_1_v5_gn_3_28001 0.5kb downstream 0.5kb downstream 3102   true Lsat_1_v8_lg_3: 36357290-36360391 Lactuca sativa
Lsat_1_v5_gn_3_28001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 36357290-36357789 Lactuca sativa
Lsat_1_v5_gn_3_28001 1.0kb upstream 1.0kb upstream 3602   true Lsat_1_v8_lg_3: 36357790-36361391 Lactuca sativa
Lsat_1_v5_gn_3_28001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 36360392-36361391 Lactuca sativa
Lsat_1_v5_gn_3_28001 1.0kb downstream 1.0kb downstream 3602   true Lsat_1_v8_lg_3: 36356790-36360391 Lactuca sativa
Lsat_1_v5_gn_3_28001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 36356790-36357789 Lactuca sativa
Lsat_1_v5_gn_3_28001 2.0kb upstream 2.0kb upstream 4602   true Lsat_1_v8_lg_3: 36357790-36362391 Lactuca sativa
Lsat_1_v5_gn_3_28001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 36360392-36362391 Lactuca sativa
Lsat_1_v5_gn_3_28001 2.0kb downstream 2.0kb downstream 4602   true Lsat_1_v8_lg_3: 36355790-36360391 Lactuca sativa
Lsat_1_v5_gn_3_28001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 36355790-36357789 Lactuca sativa
Lsat_1_v5_gn_3_28001 5.0kb upstream 5.0kb upstream 7602   true Lsat_1_v8_lg_3: 36357790-36365391 Lactuca sativa
Lsat_1_v5_gn_3_28001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 36360392-36365391 Lactuca sativa
Lsat_1_v5_gn_3_28001 5.0kb downstream 5.0kb downstream 7602   true Lsat_1_v8_lg_3: 36352790-36360391 Lactuca sativa
Lsat_1_v5_gn_3_28001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 36352790-36357789 Lactuca sativa
Lsat_1_v5_gn_3_28001 10.0kb upstream 10.0kb upstream 12602   true Lsat_1_v8_lg_3: 36357790-36370391 Lactuca sativa
Lsat_1_v5_gn_3_28001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 36360392-36370391 Lactuca sativa
Lsat_1_v5_gn_3_28001 10.0kb downstream 10.0kb downstream 12602   true Lsat_1_v8_lg_3: 36347790-36360391 Lactuca sativa
Lsat_1_v5_gn_3_28001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 36347790-36357789 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473628 5263 Asterids View MSA
123748367 5271 Pentapetalae View MSA
122794432 5272 Eudicot View MSA
122043052 5273 Angiosperm View MSA
121310069 5274 Embryophyte View MSA
123347662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain