Gene : Lsat_1_v5_gn_3_27260 L. sativa V8
Defline:  (1 of 4) PTHR10044:SF98 - DETERIN Genomic Order:  814
Name:  ? Lsat_1_v5_gn_3_27260 Secondary Identifier:  ? PAC:38918698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_27260 0.5kb upstream 0.5kb upstream 3772   true Lsat_1_v8_lg_3: 35475809-35479580 Lactuca sativa
Lsat_1_v5_gn_3_27260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 35479081-35479580 Lactuca sativa
Lsat_1_v5_gn_3_27260 0.5kb downstream 0.5kb downstream 3772   true Lsat_1_v8_lg_3: 35475309-35479080 Lactuca sativa
Lsat_1_v5_gn_3_27260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 35475309-35475808 Lactuca sativa
Lsat_1_v5_gn_3_27260 1.0kb upstream 1.0kb upstream 4272   true Lsat_1_v8_lg_3: 35475809-35480080 Lactuca sativa
Lsat_1_v5_gn_3_27260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 35479081-35480080 Lactuca sativa
Lsat_1_v5_gn_3_27260 1.0kb downstream 1.0kb downstream 4272   true Lsat_1_v8_lg_3: 35474809-35479080 Lactuca sativa
Lsat_1_v5_gn_3_27260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 35474809-35475808 Lactuca sativa
Lsat_1_v5_gn_3_27260 2.0kb upstream 2.0kb upstream 5272   true Lsat_1_v8_lg_3: 35475809-35481080 Lactuca sativa
Lsat_1_v5_gn_3_27260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 35479081-35481080 Lactuca sativa
Lsat_1_v5_gn_3_27260 2.0kb downstream 2.0kb downstream 5272   true Lsat_1_v8_lg_3: 35473809-35479080 Lactuca sativa
Lsat_1_v5_gn_3_27260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 35473809-35475808 Lactuca sativa
Lsat_1_v5_gn_3_27260 5.0kb upstream 5.0kb upstream 8272   true Lsat_1_v8_lg_3: 35475809-35484080 Lactuca sativa
Lsat_1_v5_gn_3_27260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 35479081-35484080 Lactuca sativa
Lsat_1_v5_gn_3_27260 5.0kb downstream 5.0kb downstream 8272   true Lsat_1_v8_lg_3: 35470809-35479080 Lactuca sativa
Lsat_1_v5_gn_3_27260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 35470809-35475808 Lactuca sativa
Lsat_1_v5_gn_3_27260 10.0kb upstream 10.0kb upstream 13272   true Lsat_1_v8_lg_3: 35475809-35489080 Lactuca sativa
Lsat_1_v5_gn_3_27260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 35479081-35489080 Lactuca sativa
Lsat_1_v5_gn_3_27260 10.0kb downstream 10.0kb downstream 13272   true Lsat_1_v8_lg_3: 35465809-35479080 Lactuca sativa
Lsat_1_v5_gn_3_27260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 35465809-35475808 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472232 5263 Asterids View MSA
123743659 5271 Pentapetalae View MSA
122789603 5272 Eudicot View MSA
122049733 5273 Angiosperm View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain