Gene : Lsat_1_v5_gn_3_27220 L. sativa V8
Defline:  (1 of 1) PTHR32370:SF7 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 Genomic Order:  815
Name:  ? Lsat_1_v5_gn_3_27220 Secondary Identifier:  ? PAC:38919694
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_27220 0.5kb upstream 0.5kb upstream 2636   true Lsat_1_v8_lg_3: 35547947-35550582 Lactuca sativa
Lsat_1_v5_gn_3_27220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 35550083-35550582 Lactuca sativa
Lsat_1_v5_gn_3_27220 0.5kb downstream 0.5kb downstream 2636   true Lsat_1_v8_lg_3: 35547447-35550082 Lactuca sativa
Lsat_1_v5_gn_3_27220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 35547447-35547946 Lactuca sativa
Lsat_1_v5_gn_3_27220 1.0kb upstream 1.0kb upstream 3136   true Lsat_1_v8_lg_3: 35547947-35551082 Lactuca sativa
Lsat_1_v5_gn_3_27220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 35550083-35551082 Lactuca sativa
Lsat_1_v5_gn_3_27220 1.0kb downstream 1.0kb downstream 3136   true Lsat_1_v8_lg_3: 35546947-35550082 Lactuca sativa
Lsat_1_v5_gn_3_27220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 35546947-35547946 Lactuca sativa
Lsat_1_v5_gn_3_27220 2.0kb upstream 2.0kb upstream 4136   true Lsat_1_v8_lg_3: 35547947-35552082 Lactuca sativa
Lsat_1_v5_gn_3_27220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 35550083-35552082 Lactuca sativa
Lsat_1_v5_gn_3_27220 2.0kb downstream 2.0kb downstream 4136   true Lsat_1_v8_lg_3: 35545947-35550082 Lactuca sativa
Lsat_1_v5_gn_3_27220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 35545947-35547946 Lactuca sativa
Lsat_1_v5_gn_3_27220 5.0kb upstream 5.0kb upstream 7136   true Lsat_1_v8_lg_3: 35547947-35555082 Lactuca sativa
Lsat_1_v5_gn_3_27220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 35550083-35555082 Lactuca sativa
Lsat_1_v5_gn_3_27220 5.0kb downstream 5.0kb downstream 7136   true Lsat_1_v8_lg_3: 35542947-35550082 Lactuca sativa
Lsat_1_v5_gn_3_27220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 35542947-35547946 Lactuca sativa
Lsat_1_v5_gn_3_27220 10.0kb upstream 10.0kb upstream 12136   true Lsat_1_v8_lg_3: 35547947-35560082 Lactuca sativa
Lsat_1_v5_gn_3_27220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 35550083-35560082 Lactuca sativa
Lsat_1_v5_gn_3_27220 10.0kb downstream 10.0kb downstream 12136   true Lsat_1_v8_lg_3: 35537947-35550082 Lactuca sativa
Lsat_1_v5_gn_3_27220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 35537947-35547946 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469112 5263 Asterids View MSA
123737870 5271 Pentapetalae View MSA
122787128 5272 Eudicot View MSA
122043387 5273 Angiosperm View MSA
121310115 5274 Embryophyte View MSA
123347692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain