Gene : Lsat_1_v5_gn_3_27620 L. sativa V8
Defline:  (1 of 1) PF07719//PF14559 - Tetratricopeptide repeat (TPR_2) // Tetratricopeptide repeat (TPR_19) Genomic Order:  873
Name:  ? Lsat_1_v5_gn_3_27620 Secondary Identifier:  ? PAC:38918064
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_27620 0.5kb upstream 0.5kb upstream 1848   true Lsat_1_v8_lg_3: 37245314-37247161 Lactuca sativa
Lsat_1_v5_gn_3_27620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 37245314-37245813 Lactuca sativa
Lsat_1_v5_gn_3_27620 0.5kb downstream 0.5kb downstream 1848   true Lsat_1_v8_lg_3: 37245814-37247661 Lactuca sativa
Lsat_1_v5_gn_3_27620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 37247162-37247661 Lactuca sativa
Lsat_1_v5_gn_3_27620 1.0kb upstream 1.0kb upstream 2348   true Lsat_1_v8_lg_3: 37244814-37247161 Lactuca sativa
Lsat_1_v5_gn_3_27620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 37244814-37245813 Lactuca sativa
Lsat_1_v5_gn_3_27620 1.0kb downstream 1.0kb downstream 2348   true Lsat_1_v8_lg_3: 37245814-37248161 Lactuca sativa
Lsat_1_v5_gn_3_27620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 37247162-37248161 Lactuca sativa
Lsat_1_v5_gn_3_27620 2.0kb upstream 2.0kb upstream 3348   true Lsat_1_v8_lg_3: 37243814-37247161 Lactuca sativa
Lsat_1_v5_gn_3_27620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 37243814-37245813 Lactuca sativa
Lsat_1_v5_gn_3_27620 2.0kb downstream 2.0kb downstream 3348   true Lsat_1_v8_lg_3: 37245814-37249161 Lactuca sativa
Lsat_1_v5_gn_3_27620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 37247162-37249161 Lactuca sativa
Lsat_1_v5_gn_3_27620 5.0kb upstream 5.0kb upstream 6348   true Lsat_1_v8_lg_3: 37240814-37247161 Lactuca sativa
Lsat_1_v5_gn_3_27620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 37240814-37245813 Lactuca sativa
Lsat_1_v5_gn_3_27620 5.0kb downstream 5.0kb downstream 6348   true Lsat_1_v8_lg_3: 37245814-37252161 Lactuca sativa
Lsat_1_v5_gn_3_27620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 37247162-37252161 Lactuca sativa
Lsat_1_v5_gn_3_27620 10.0kb upstream 10.0kb upstream 11348   true Lsat_1_v8_lg_3: 37235814-37247161 Lactuca sativa
Lsat_1_v5_gn_3_27620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 37235814-37245813 Lactuca sativa
Lsat_1_v5_gn_3_27620 10.0kb downstream 10.0kb downstream 11348   true Lsat_1_v8_lg_3: 37245814-37257161 Lactuca sativa
Lsat_1_v5_gn_3_27620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 37247162-37257161 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478411 5263 Asterids View MSA
123741274 5271 Pentapetalae View MSA
122788681 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain