Gene : Lsat_1_v5_gn_3_29940 L. sativa V8
Defline:  (1 of 4) PTHR24012:SF415 - F12A21.10-RELATED Genomic Order:  925
Name:  ? Lsat_1_v5_gn_3_29940 Secondary Identifier:  ? PAC:38918350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_29940 0.5kb upstream 0.5kb upstream 3048   true Lsat_1_v8_lg_3: 39148622-39151669 Lactuca sativa
Lsat_1_v5_gn_3_29940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 39151170-39151669 Lactuca sativa
Lsat_1_v5_gn_3_29940 0.5kb downstream 0.5kb downstream 3048   true Lsat_1_v8_lg_3: 39148122-39151169 Lactuca sativa
Lsat_1_v5_gn_3_29940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 39148122-39148621 Lactuca sativa
Lsat_1_v5_gn_3_29940 1.0kb upstream 1.0kb upstream 3548   true Lsat_1_v8_lg_3: 39148622-39152169 Lactuca sativa
Lsat_1_v5_gn_3_29940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 39151170-39152169 Lactuca sativa
Lsat_1_v5_gn_3_29940 1.0kb downstream 1.0kb downstream 3548   true Lsat_1_v8_lg_3: 39147622-39151169 Lactuca sativa
Lsat_1_v5_gn_3_29940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 39147622-39148621 Lactuca sativa
Lsat_1_v5_gn_3_29940 2.0kb upstream 2.0kb upstream 4548   true Lsat_1_v8_lg_3: 39148622-39153169 Lactuca sativa
Lsat_1_v5_gn_3_29940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 39151170-39153169 Lactuca sativa
Lsat_1_v5_gn_3_29940 2.0kb downstream 2.0kb downstream 4548   true Lsat_1_v8_lg_3: 39146622-39151169 Lactuca sativa
Lsat_1_v5_gn_3_29940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 39146622-39148621 Lactuca sativa
Lsat_1_v5_gn_3_29940 5.0kb upstream 5.0kb upstream 7548   true Lsat_1_v8_lg_3: 39148622-39156169 Lactuca sativa
Lsat_1_v5_gn_3_29940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 39151170-39156169 Lactuca sativa
Lsat_1_v5_gn_3_29940 5.0kb downstream 5.0kb downstream 7548   true Lsat_1_v8_lg_3: 39143622-39151169 Lactuca sativa
Lsat_1_v5_gn_3_29940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 39143622-39148621 Lactuca sativa
Lsat_1_v5_gn_3_29940 10.0kb upstream 10.0kb upstream 12548   true Lsat_1_v8_lg_3: 39148622-39161169 Lactuca sativa
Lsat_1_v5_gn_3_29940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 39151170-39161169 Lactuca sativa
Lsat_1_v5_gn_3_29940 10.0kb downstream 10.0kb downstream 12548   true Lsat_1_v8_lg_3: 39138622-39151169 Lactuca sativa
Lsat_1_v5_gn_3_29940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 39138622-39148621 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466848 5263 Asterids View MSA
123745062 5271 Pentapetalae View MSA
122789647 5272 Eudicot View MSA
122044254 5273 Angiosperm View MSA
121348969 5274 Embryophyte View MSA
123381105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain