Gene : Lsat_1_v5_gn_3_30120 L. sativa V8
Defline:  (1 of 1) PTHR11599//PTHR11599:SF44 - PROTEASOME SUBUNIT ALPHA/BETA // AT05866P-RELATED Genomic Order:  918
Name:  ? Lsat_1_v5_gn_3_30120 Secondary Identifier:  ? PAC:38920802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_30120 0.5kb upstream 0.5kb upstream 3134   true Lsat_1_v8_lg_3: 38930575-38933708 Lactuca sativa
Lsat_1_v5_gn_3_30120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 38933209-38933708 Lactuca sativa
Lsat_1_v5_gn_3_30120 0.5kb downstream 0.5kb downstream 3134   true Lsat_1_v8_lg_3: 38930075-38933208 Lactuca sativa
Lsat_1_v5_gn_3_30120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 38930075-38930574 Lactuca sativa
Lsat_1_v5_gn_3_30120 1.0kb upstream 1.0kb upstream 3634   true Lsat_1_v8_lg_3: 38930575-38934208 Lactuca sativa
Lsat_1_v5_gn_3_30120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 38933209-38934208 Lactuca sativa
Lsat_1_v5_gn_3_30120 1.0kb downstream 1.0kb downstream 3634   true Lsat_1_v8_lg_3: 38929575-38933208 Lactuca sativa
Lsat_1_v5_gn_3_30120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 38929575-38930574 Lactuca sativa
Lsat_1_v5_gn_3_30120 2.0kb upstream 2.0kb upstream 4634   true Lsat_1_v8_lg_3: 38930575-38935208 Lactuca sativa
Lsat_1_v5_gn_3_30120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 38933209-38935208 Lactuca sativa
Lsat_1_v5_gn_3_30120 2.0kb downstream 2.0kb downstream 4634   true Lsat_1_v8_lg_3: 38928575-38933208 Lactuca sativa
Lsat_1_v5_gn_3_30120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 38928575-38930574 Lactuca sativa
Lsat_1_v5_gn_3_30120 5.0kb upstream 5.0kb upstream 7634   true Lsat_1_v8_lg_3: 38930575-38938208 Lactuca sativa
Lsat_1_v5_gn_3_30120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 38933209-38938208 Lactuca sativa
Lsat_1_v5_gn_3_30120 5.0kb downstream 5.0kb downstream 7634   true Lsat_1_v8_lg_3: 38925575-38933208 Lactuca sativa
Lsat_1_v5_gn_3_30120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 38925575-38930574 Lactuca sativa
Lsat_1_v5_gn_3_30120 10.0kb upstream 10.0kb upstream 12634   true Lsat_1_v8_lg_3: 38930575-38943208 Lactuca sativa
Lsat_1_v5_gn_3_30120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 38933209-38943208 Lactuca sativa
Lsat_1_v5_gn_3_30120 10.0kb downstream 10.0kb downstream 12634   true Lsat_1_v8_lg_3: 38920575-38933208 Lactuca sativa
Lsat_1_v5_gn_3_30120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 38920575-38930574 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471281 5263 Asterids View MSA
123741626 5271 Pentapetalae View MSA
122791529 5272 Eudicot View MSA
122044659 5273 Angiosperm View MSA
121345810 5274 Embryophyte View MSA
123428515 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain