Gene : Lsat_1_v5_gn_3_31340 L. sativa V8
Defline:  (1 of 4) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  971
Name:  ? Lsat_1_v5_gn_3_31340 Secondary Identifier:  ? PAC:38917835
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_31340 0.5kb upstream 0.5kb upstream 4180   true Lsat_1_v8_lg_3: 40843013-40847192 Lactuca sativa
Lsat_1_v5_gn_3_31340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 40846693-40847192 Lactuca sativa
Lsat_1_v5_gn_3_31340 0.5kb downstream 0.5kb downstream 4180   true Lsat_1_v8_lg_3: 40842513-40846692 Lactuca sativa
Lsat_1_v5_gn_3_31340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 40842513-40843012 Lactuca sativa
Lsat_1_v5_gn_3_31340 1.0kb upstream 1.0kb upstream 4680   true Lsat_1_v8_lg_3: 40843013-40847692 Lactuca sativa
Lsat_1_v5_gn_3_31340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 40846693-40847692 Lactuca sativa
Lsat_1_v5_gn_3_31340 1.0kb downstream 1.0kb downstream 4680   true Lsat_1_v8_lg_3: 40842013-40846692 Lactuca sativa
Lsat_1_v5_gn_3_31340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 40842013-40843012 Lactuca sativa
Lsat_1_v5_gn_3_31340 2.0kb upstream 2.0kb upstream 5680   true Lsat_1_v8_lg_3: 40843013-40848692 Lactuca sativa
Lsat_1_v5_gn_3_31340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 40846693-40848692 Lactuca sativa
Lsat_1_v5_gn_3_31340 2.0kb downstream 2.0kb downstream 5680   true Lsat_1_v8_lg_3: 40841013-40846692 Lactuca sativa
Lsat_1_v5_gn_3_31340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 40841013-40843012 Lactuca sativa
Lsat_1_v5_gn_3_31340 5.0kb upstream 5.0kb upstream 8680   true Lsat_1_v8_lg_3: 40843013-40851692 Lactuca sativa
Lsat_1_v5_gn_3_31340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 40846693-40851692 Lactuca sativa
Lsat_1_v5_gn_3_31340 5.0kb downstream 5.0kb downstream 8680   true Lsat_1_v8_lg_3: 40838013-40846692 Lactuca sativa
Lsat_1_v5_gn_3_31340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 40838013-40843012 Lactuca sativa
Lsat_1_v5_gn_3_31340 10.0kb upstream 10.0kb upstream 13680   true Lsat_1_v8_lg_3: 40843013-40856692 Lactuca sativa
Lsat_1_v5_gn_3_31340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 40846693-40856692 Lactuca sativa
Lsat_1_v5_gn_3_31340 10.0kb downstream 10.0kb downstream 13680   true Lsat_1_v8_lg_3: 40833013-40846692 Lactuca sativa
Lsat_1_v5_gn_3_31340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 40833013-40843012 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476035 5263 Asterids View MSA
123741610 5271 Pentapetalae View MSA
122785938 5272 Eudicot View MSA
122042412 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain