Gene : Lsat_1_v5_gn_3_30780 L. sativa V8
Defline:  (1 of 3) PTHR15601//PTHR15601:SF4 - STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 // SUBFAMILY NOT NAMED Genomic Order:  965
Name:  ? Lsat_1_v5_gn_3_30780 Secondary Identifier:  ? PAC:38916433
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_30780 0.5kb upstream 0.5kb upstream 1638   true Lsat_1_v8_lg_3: 40480113-40481750 Lactuca sativa
Lsat_1_v5_gn_3_30780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 40481251-40481750 Lactuca sativa
Lsat_1_v5_gn_3_30780 0.5kb downstream 0.5kb downstream 1638   true Lsat_1_v8_lg_3: 40479613-40481250 Lactuca sativa
Lsat_1_v5_gn_3_30780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 40479613-40480112 Lactuca sativa
Lsat_1_v5_gn_3_30780 1.0kb upstream 1.0kb upstream 2138   true Lsat_1_v8_lg_3: 40480113-40482250 Lactuca sativa
Lsat_1_v5_gn_3_30780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 40481251-40482250 Lactuca sativa
Lsat_1_v5_gn_3_30780 1.0kb downstream 1.0kb downstream 2138   true Lsat_1_v8_lg_3: 40479113-40481250 Lactuca sativa
Lsat_1_v5_gn_3_30780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 40479113-40480112 Lactuca sativa
Lsat_1_v5_gn_3_30780 2.0kb upstream 2.0kb upstream 3138   true Lsat_1_v8_lg_3: 40480113-40483250 Lactuca sativa
Lsat_1_v5_gn_3_30780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 40481251-40483250 Lactuca sativa
Lsat_1_v5_gn_3_30780 2.0kb downstream 2.0kb downstream 3138   true Lsat_1_v8_lg_3: 40478113-40481250 Lactuca sativa
Lsat_1_v5_gn_3_30780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 40478113-40480112 Lactuca sativa
Lsat_1_v5_gn_3_30780 5.0kb upstream 5.0kb upstream 6138   true Lsat_1_v8_lg_3: 40480113-40486250 Lactuca sativa
Lsat_1_v5_gn_3_30780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 40481251-40486250 Lactuca sativa
Lsat_1_v5_gn_3_30780 5.0kb downstream 5.0kb downstream 6138   true Lsat_1_v8_lg_3: 40475113-40481250 Lactuca sativa
Lsat_1_v5_gn_3_30780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 40475113-40480112 Lactuca sativa
Lsat_1_v5_gn_3_30780 10.0kb upstream 10.0kb upstream 11138   true Lsat_1_v8_lg_3: 40480113-40491250 Lactuca sativa
Lsat_1_v5_gn_3_30780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 40481251-40491250 Lactuca sativa
Lsat_1_v5_gn_3_30780 10.0kb downstream 10.0kb downstream 11138   true Lsat_1_v8_lg_3: 40470113-40481250 Lactuca sativa
Lsat_1_v5_gn_3_30780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 40470113-40480112 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453577 5263 Asterids View MSA
123745695 5271 Pentapetalae View MSA
122795442 5272 Eudicot View MSA
122050162 5273 Angiosperm View MSA
121345372 5274 Embryophyte View MSA
123428764 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain