Gene : Lsat_1_v5_gn_3_7300 L. sativa V8
Defline:  (1 of 2) PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED Genomic Order:  217
Name:  ? Lsat_1_v5_gn_3_7300 Secondary Identifier:  ? PAC:38917317
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5695 Lactuca sativa pathologic  
Lsativa PWY-6608 Lactuca sativa pathologic  
Lsativa PWY-6609 Lactuca sativa pathologic  
Lsativa PWY-7179 Lactuca sativa pathologic  
Lsativa SALVADEHYPOX-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_7300 0.5kb upstream 0.5kb upstream 2363   true Lsat_1_v8_lg_3: 9877508-9879870 Lactuca sativa
Lsat_1_v5_gn_3_7300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 9879371-9879870 Lactuca sativa
Lsat_1_v5_gn_3_7300 0.5kb downstream 0.5kb downstream 2363   true Lsat_1_v8_lg_3: 9877008-9879370 Lactuca sativa
Lsat_1_v5_gn_3_7300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 9877008-9877507 Lactuca sativa
Lsat_1_v5_gn_3_7300 1.0kb upstream 1.0kb upstream 2863   true Lsat_1_v8_lg_3: 9877508-9880370 Lactuca sativa
Lsat_1_v5_gn_3_7300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 9879371-9880370 Lactuca sativa
Lsat_1_v5_gn_3_7300 1.0kb downstream 1.0kb downstream 2863   true Lsat_1_v8_lg_3: 9876508-9879370 Lactuca sativa
Lsat_1_v5_gn_3_7300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 9876508-9877507 Lactuca sativa
Lsat_1_v5_gn_3_7300 2.0kb upstream 2.0kb upstream 3863   true Lsat_1_v8_lg_3: 9877508-9881370 Lactuca sativa
Lsat_1_v5_gn_3_7300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 9879371-9881370 Lactuca sativa
Lsat_1_v5_gn_3_7300 2.0kb downstream 2.0kb downstream 3863   true Lsat_1_v8_lg_3: 9875508-9879370 Lactuca sativa
Lsat_1_v5_gn_3_7300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 9875508-9877507 Lactuca sativa
Lsat_1_v5_gn_3_7300 5.0kb upstream 5.0kb upstream 6863   true Lsat_1_v8_lg_3: 9877508-9884370 Lactuca sativa
Lsat_1_v5_gn_3_7300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 9879371-9884370 Lactuca sativa
Lsat_1_v5_gn_3_7300 5.0kb downstream 5.0kb downstream 6863   true Lsat_1_v8_lg_3: 9872508-9879370 Lactuca sativa
Lsat_1_v5_gn_3_7300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 9872508-9877507 Lactuca sativa
Lsat_1_v5_gn_3_7300 10.0kb upstream 10.0kb upstream 11863   true Lsat_1_v8_lg_3: 9877508-9889370 Lactuca sativa
Lsat_1_v5_gn_3_7300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 9879371-9889370 Lactuca sativa
Lsat_1_v5_gn_3_7300 10.0kb downstream 10.0kb downstream 11863   true Lsat_1_v8_lg_3: 9867508-9879370 Lactuca sativa
Lsat_1_v5_gn_3_7300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 9867508-9877507 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469529 5263 Asterids View MSA
123752515 5271 Pentapetalae View MSA
122795676 5272 Eudicot View MSA
122049584 5273 Angiosperm View MSA
121311488 5274 Embryophyte View MSA
123348779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain