Gene : Lsat_1_v5_gn_3_78560 L. sativa V8
Defline:  (1 of 7) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  2406
Name:  ? Lsat_1_v5_gn_3_78560 Secondary Identifier:  ? PAC:38918568
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_78560 0.5kb upstream 0.5kb upstream 2562   true Lsat_1_v8_lg_3: 107207972-107210533 Lactuca sativa
Lsat_1_v5_gn_3_78560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 107207972-107208471 Lactuca sativa
Lsat_1_v5_gn_3_78560 0.5kb downstream 0.5kb downstream 2562   true Lsat_1_v8_lg_3: 107208472-107211033 Lactuca sativa
Lsat_1_v5_gn_3_78560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 107210534-107211033 Lactuca sativa
Lsat_1_v5_gn_3_78560 1.0kb upstream 1.0kb upstream 3062   true Lsat_1_v8_lg_3: 107207472-107210533 Lactuca sativa
Lsat_1_v5_gn_3_78560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 107207472-107208471 Lactuca sativa
Lsat_1_v5_gn_3_78560 1.0kb downstream 1.0kb downstream 3062   true Lsat_1_v8_lg_3: 107208472-107211533 Lactuca sativa
Lsat_1_v5_gn_3_78560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 107210534-107211533 Lactuca sativa
Lsat_1_v5_gn_3_78560 2.0kb upstream 2.0kb upstream 4062   true Lsat_1_v8_lg_3: 107206472-107210533 Lactuca sativa
Lsat_1_v5_gn_3_78560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 107206472-107208471 Lactuca sativa
Lsat_1_v5_gn_3_78560 2.0kb downstream 2.0kb downstream 4062   true Lsat_1_v8_lg_3: 107208472-107212533 Lactuca sativa
Lsat_1_v5_gn_3_78560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 107210534-107212533 Lactuca sativa
Lsat_1_v5_gn_3_78560 5.0kb upstream 5.0kb upstream 7062   true Lsat_1_v8_lg_3: 107203472-107210533 Lactuca sativa
Lsat_1_v5_gn_3_78560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 107203472-107208471 Lactuca sativa
Lsat_1_v5_gn_3_78560 5.0kb downstream 5.0kb downstream 7062   true Lsat_1_v8_lg_3: 107208472-107215533 Lactuca sativa
Lsat_1_v5_gn_3_78560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 107210534-107215533 Lactuca sativa
Lsat_1_v5_gn_3_78560 10.0kb upstream 10.0kb upstream 12062   true Lsat_1_v8_lg_3: 107198472-107210533 Lactuca sativa
Lsat_1_v5_gn_3_78560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 107198472-107208471 Lactuca sativa
Lsat_1_v5_gn_3_78560 10.0kb downstream 10.0kb downstream 12062   true Lsat_1_v8_lg_3: 107208472-107220533 Lactuca sativa
Lsat_1_v5_gn_3_78560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 107210534-107220533 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027142 5273 Angiosperm View MSA
121480693 5263 Asterids View MSA
123753359 5271 Pentapetalae View MSA
122796563 5272 Eudicot View MSA
121296838 5274 Embryophyte View MSA
123334950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain