Gene : Lsat_1_v5_gn_3_81460 L. sativa V8
Defline:  (1 of 3) K08332 - vacuolar protein 8 (VAC8) Genomic Order:  2490
Name:  ? Lsat_1_v5_gn_3_81460 Secondary Identifier:  ? PAC:38916349
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_81460 0.5kb upstream 0.5kb upstream 3101   true Lsat_1_v8_lg_3: 114298321-114301421 Lactuca sativa
Lsat_1_v5_gn_3_81460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 114300922-114301421 Lactuca sativa
Lsat_1_v5_gn_3_81460 0.5kb downstream 0.5kb downstream 3101   true Lsat_1_v8_lg_3: 114297821-114300921 Lactuca sativa
Lsat_1_v5_gn_3_81460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 114297821-114298320 Lactuca sativa
Lsat_1_v5_gn_3_81460 1.0kb upstream 1.0kb upstream 3601   true Lsat_1_v8_lg_3: 114298321-114301921 Lactuca sativa
Lsat_1_v5_gn_3_81460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 114300922-114301921 Lactuca sativa
Lsat_1_v5_gn_3_81460 1.0kb downstream 1.0kb downstream 3601   true Lsat_1_v8_lg_3: 114297321-114300921 Lactuca sativa
Lsat_1_v5_gn_3_81460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 114297321-114298320 Lactuca sativa
Lsat_1_v5_gn_3_81460 2.0kb upstream 2.0kb upstream 4601   true Lsat_1_v8_lg_3: 114298321-114302921 Lactuca sativa
Lsat_1_v5_gn_3_81460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 114300922-114302921 Lactuca sativa
Lsat_1_v5_gn_3_81460 2.0kb downstream 2.0kb downstream 4601   true Lsat_1_v8_lg_3: 114296321-114300921 Lactuca sativa
Lsat_1_v5_gn_3_81460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 114296321-114298320 Lactuca sativa
Lsat_1_v5_gn_3_81460 5.0kb upstream 5.0kb upstream 7601   true Lsat_1_v8_lg_3: 114298321-114305921 Lactuca sativa
Lsat_1_v5_gn_3_81460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 114300922-114305921 Lactuca sativa
Lsat_1_v5_gn_3_81460 5.0kb downstream 5.0kb downstream 7601   true Lsat_1_v8_lg_3: 114293321-114300921 Lactuca sativa
Lsat_1_v5_gn_3_81460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 114293321-114298320 Lactuca sativa
Lsat_1_v5_gn_3_81460 10.0kb upstream 10.0kb upstream 12601   true Lsat_1_v8_lg_3: 114298321-114310921 Lactuca sativa
Lsat_1_v5_gn_3_81460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 114300922-114310921 Lactuca sativa
Lsat_1_v5_gn_3_81460 10.0kb downstream 10.0kb downstream 12601   true Lsat_1_v8_lg_3: 114288321-114300921 Lactuca sativa
Lsat_1_v5_gn_3_81460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 114288321-114298320 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476040 5263 Asterids View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain