Gene : Lsat_1_v5_gn_3_83620 L. sativa V8
Defline:  (1 of 6) PF12734 - Cysteine-rich TM module stress tolerance (CYSTM) Genomic Order:  2530
Name:  ? Lsat_1_v5_gn_3_83620 Secondary Identifier:  ? PAC:38915557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_83620 0.5kb upstream 0.5kb upstream 1133   true Lsat_1_v8_lg_3: 118225762-118226894 Lactuca sativa
Lsat_1_v5_gn_3_83620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 118226395-118226894 Lactuca sativa
Lsat_1_v5_gn_3_83620 0.5kb downstream 0.5kb downstream 1133   true Lsat_1_v8_lg_3: 118225262-118226394 Lactuca sativa
Lsat_1_v5_gn_3_83620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 118225262-118225761 Lactuca sativa
Lsat_1_v5_gn_3_83620 1.0kb upstream 1.0kb upstream 1633   true Lsat_1_v8_lg_3: 118225762-118227394 Lactuca sativa
Lsat_1_v5_gn_3_83620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 118226395-118227394 Lactuca sativa
Lsat_1_v5_gn_3_83620 1.0kb downstream 1.0kb downstream 1633   true Lsat_1_v8_lg_3: 118224762-118226394 Lactuca sativa
Lsat_1_v5_gn_3_83620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 118224762-118225761 Lactuca sativa
Lsat_1_v5_gn_3_83620 2.0kb upstream 2.0kb upstream 2633   true Lsat_1_v8_lg_3: 118225762-118228394 Lactuca sativa
Lsat_1_v5_gn_3_83620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 118226395-118228394 Lactuca sativa
Lsat_1_v5_gn_3_83620 2.0kb downstream 2.0kb downstream 2633   true Lsat_1_v8_lg_3: 118223762-118226394 Lactuca sativa
Lsat_1_v5_gn_3_83620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 118223762-118225761 Lactuca sativa
Lsat_1_v5_gn_3_83620 5.0kb upstream 5.0kb upstream 5633   true Lsat_1_v8_lg_3: 118225762-118231394 Lactuca sativa
Lsat_1_v5_gn_3_83620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 118226395-118231394 Lactuca sativa
Lsat_1_v5_gn_3_83620 5.0kb downstream 5.0kb downstream 5633   true Lsat_1_v8_lg_3: 118220762-118226394 Lactuca sativa
Lsat_1_v5_gn_3_83620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 118220762-118225761 Lactuca sativa
Lsat_1_v5_gn_3_83620 10.0kb upstream 10.0kb upstream 10633   true Lsat_1_v8_lg_3: 118225762-118236394 Lactuca sativa
Lsat_1_v5_gn_3_83620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 118226395-118236394 Lactuca sativa
Lsat_1_v5_gn_3_83620 10.0kb downstream 10.0kb downstream 10633   true Lsat_1_v8_lg_3: 118215762-118226394 Lactuca sativa
Lsat_1_v5_gn_3_83620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 118215762-118225761 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026920 5273 Angiosperm View MSA
121472255 5263 Asterids View MSA
123744649 5271 Pentapetalae View MSA
122794979 5272 Eudicot View MSA
121348545 5274 Embryophyte View MSA
123380908 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain