Gene : Lsat_1_v5_gn_3_86620 L. sativa V8
Defline:  (1 of 1) PTHR11649//PTHR11649:SF49 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2603
Name:  ? Lsat_1_v5_gn_3_86620 Secondary Identifier:  ? PAC:38916645
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_86620 0.5kb upstream 0.5kb upstream 2061   true Lsat_1_v8_lg_3: 124711461-124713521 Lactuca sativa
Lsat_1_v5_gn_3_86620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 124711461-124711960 Lactuca sativa
Lsat_1_v5_gn_3_86620 0.5kb downstream 0.5kb downstream 2061   true Lsat_1_v8_lg_3: 124711961-124714021 Lactuca sativa
Lsat_1_v5_gn_3_86620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 124713522-124714021 Lactuca sativa
Lsat_1_v5_gn_3_86620 1.0kb upstream 1.0kb upstream 2561   true Lsat_1_v8_lg_3: 124710961-124713521 Lactuca sativa
Lsat_1_v5_gn_3_86620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 124710961-124711960 Lactuca sativa
Lsat_1_v5_gn_3_86620 1.0kb downstream 1.0kb downstream 2561   true Lsat_1_v8_lg_3: 124711961-124714521 Lactuca sativa
Lsat_1_v5_gn_3_86620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 124713522-124714521 Lactuca sativa
Lsat_1_v5_gn_3_86620 2.0kb upstream 2.0kb upstream 3561   true Lsat_1_v8_lg_3: 124709961-124713521 Lactuca sativa
Lsat_1_v5_gn_3_86620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 124709961-124711960 Lactuca sativa
Lsat_1_v5_gn_3_86620 2.0kb downstream 2.0kb downstream 3561   true Lsat_1_v8_lg_3: 124711961-124715521 Lactuca sativa
Lsat_1_v5_gn_3_86620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 124713522-124715521 Lactuca sativa
Lsat_1_v5_gn_3_86620 5.0kb upstream 5.0kb upstream 6561   true Lsat_1_v8_lg_3: 124706961-124713521 Lactuca sativa
Lsat_1_v5_gn_3_86620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 124706961-124711960 Lactuca sativa
Lsat_1_v5_gn_3_86620 5.0kb downstream 5.0kb downstream 6561   true Lsat_1_v8_lg_3: 124711961-124718521 Lactuca sativa
Lsat_1_v5_gn_3_86620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 124713522-124718521 Lactuca sativa
Lsat_1_v5_gn_3_86620 10.0kb upstream 10.0kb upstream 11561   true Lsat_1_v8_lg_3: 124701961-124713521 Lactuca sativa
Lsat_1_v5_gn_3_86620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 124701961-124711960 Lactuca sativa
Lsat_1_v5_gn_3_86620 10.0kb downstream 10.0kb downstream 11561   true Lsat_1_v8_lg_3: 124711961-124723521 Lactuca sativa
Lsat_1_v5_gn_3_86620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 124713522-124723521 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467239 5263 Asterids View MSA
123739065 5271 Pentapetalae View MSA
122788793 5272 Eudicot View MSA
122045956 5273 Angiosperm View MSA
121345764 5274 Embryophyte View MSA
123427955 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain