Gene : Lsat_1_v5_gn_3_89301 L. sativa V8
Defline:  (1 of 2) K00763 - nicotinate phosphoribosyltransferase (pncB, NAPRT1) Genomic Order:  2699
Name:  ? Lsat_1_v5_gn_3_89301 Secondary Identifier:  ? PAC:38920883
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5381 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_89301 0.5kb upstream 0.5kb upstream 4658   true Lsat_1_v8_lg_3: 135161672-135166329 Lactuca sativa
Lsat_1_v5_gn_3_89301 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 135161672-135162171 Lactuca sativa
Lsat_1_v5_gn_3_89301 0.5kb downstream 0.5kb downstream 4658   true Lsat_1_v8_lg_3: 135162172-135166829 Lactuca sativa
Lsat_1_v5_gn_3_89301 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 135166330-135166829 Lactuca sativa
Lsat_1_v5_gn_3_89301 1.0kb upstream 1.0kb upstream 5158   true Lsat_1_v8_lg_3: 135161172-135166329 Lactuca sativa
Lsat_1_v5_gn_3_89301 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 135161172-135162171 Lactuca sativa
Lsat_1_v5_gn_3_89301 1.0kb downstream 1.0kb downstream 5158   true Lsat_1_v8_lg_3: 135162172-135167329 Lactuca sativa
Lsat_1_v5_gn_3_89301 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 135166330-135167329 Lactuca sativa
Lsat_1_v5_gn_3_89301 2.0kb upstream 2.0kb upstream 6158   true Lsat_1_v8_lg_3: 135160172-135166329 Lactuca sativa
Lsat_1_v5_gn_3_89301 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 135160172-135162171 Lactuca sativa
Lsat_1_v5_gn_3_89301 2.0kb downstream 2.0kb downstream 6158   true Lsat_1_v8_lg_3: 135162172-135168329 Lactuca sativa
Lsat_1_v5_gn_3_89301 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 135166330-135168329 Lactuca sativa
Lsat_1_v5_gn_3_89301 5.0kb upstream 5.0kb upstream 9158   true Lsat_1_v8_lg_3: 135157172-135166329 Lactuca sativa
Lsat_1_v5_gn_3_89301 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 135157172-135162171 Lactuca sativa
Lsat_1_v5_gn_3_89301 5.0kb downstream 5.0kb downstream 9158   true Lsat_1_v8_lg_3: 135162172-135171329 Lactuca sativa
Lsat_1_v5_gn_3_89301 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 135166330-135171329 Lactuca sativa
Lsat_1_v5_gn_3_89301 10.0kb upstream 10.0kb upstream 14158   true Lsat_1_v8_lg_3: 135152172-135166329 Lactuca sativa
Lsat_1_v5_gn_3_89301 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 135152172-135162171 Lactuca sativa
Lsat_1_v5_gn_3_89301 10.0kb downstream 10.0kb downstream 14158   true Lsat_1_v8_lg_3: 135162172-135176329 Lactuca sativa
Lsat_1_v5_gn_3_89301 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 135166330-135176329 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478812 5263 Asterids View MSA
123744926 5271 Pentapetalae View MSA
122787936 5272 Eudicot View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain