Gene : Lsat_1_v5_gn_3_8960 L. sativa V8
Defline:  (1 of 2) PTHR22814//PTHR22814:SF77 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN Genomic Order:  265
Name:  ? Lsat_1_v5_gn_3_8960 Secondary Identifier:  ? PAC:38918916
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_8960 0.5kb upstream 0.5kb upstream 6139   true Lsat_1_v8_lg_3: 11602464-11608602 Lactuca sativa
Lsat_1_v5_gn_3_8960 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 11608103-11608602 Lactuca sativa
Lsat_1_v5_gn_3_8960 0.5kb downstream 0.5kb downstream 6139   true Lsat_1_v8_lg_3: 11601964-11608102 Lactuca sativa
Lsat_1_v5_gn_3_8960 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 11601964-11602463 Lactuca sativa
Lsat_1_v5_gn_3_8960 1.0kb upstream 1.0kb upstream 6639   true Lsat_1_v8_lg_3: 11602464-11609102 Lactuca sativa
Lsat_1_v5_gn_3_8960 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 11608103-11609102 Lactuca sativa
Lsat_1_v5_gn_3_8960 1.0kb downstream 1.0kb downstream 6639   true Lsat_1_v8_lg_3: 11601464-11608102 Lactuca sativa
Lsat_1_v5_gn_3_8960 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 11601464-11602463 Lactuca sativa
Lsat_1_v5_gn_3_8960 2.0kb upstream 2.0kb upstream 7639   true Lsat_1_v8_lg_3: 11602464-11610102 Lactuca sativa
Lsat_1_v5_gn_3_8960 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 11608103-11610102 Lactuca sativa
Lsat_1_v5_gn_3_8960 2.0kb downstream 2.0kb downstream 7639   true Lsat_1_v8_lg_3: 11600464-11608102 Lactuca sativa
Lsat_1_v5_gn_3_8960 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 11600464-11602463 Lactuca sativa
Lsat_1_v5_gn_3_8960 5.0kb upstream 5.0kb upstream 10639   true Lsat_1_v8_lg_3: 11602464-11613102 Lactuca sativa
Lsat_1_v5_gn_3_8960 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 11608103-11613102 Lactuca sativa
Lsat_1_v5_gn_3_8960 5.0kb downstream 5.0kb downstream 10639   true Lsat_1_v8_lg_3: 11597464-11608102 Lactuca sativa
Lsat_1_v5_gn_3_8960 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 11597464-11602463 Lactuca sativa
Lsat_1_v5_gn_3_8960 10.0kb upstream 10.0kb upstream 15639   true Lsat_1_v8_lg_3: 11602464-11618102 Lactuca sativa
Lsat_1_v5_gn_3_8960 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 11608103-11618102 Lactuca sativa
Lsat_1_v5_gn_3_8960 10.0kb downstream 10.0kb downstream 15639   true Lsat_1_v8_lg_3: 11592464-11608102 Lactuca sativa
Lsat_1_v5_gn_3_8960 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 11592464-11602463 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475904 5263 Asterids View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain