Gene : Lsat_1_v5_gn_3_8940 L. sativa V8
Defline:  (1 of 17) PF05633 - Protein of unknown function (DUF793) (DUF793) Genomic Order:  266
Name:  ? Lsat_1_v5_gn_3_8940 Secondary Identifier:  ? PAC:38919626
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_8940 0.5kb upstream 0.5kb upstream 2241   true Lsat_1_v8_lg_3: 11623018-11625258 Lactuca sativa
Lsat_1_v5_gn_3_8940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 11624759-11625258 Lactuca sativa
Lsat_1_v5_gn_3_8940 0.5kb downstream 0.5kb downstream 2241   true Lsat_1_v8_lg_3: 11622518-11624758 Lactuca sativa
Lsat_1_v5_gn_3_8940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 11622518-11623017 Lactuca sativa
Lsat_1_v5_gn_3_8940 1.0kb upstream 1.0kb upstream 2741   true Lsat_1_v8_lg_3: 11623018-11625758 Lactuca sativa
Lsat_1_v5_gn_3_8940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 11624759-11625758 Lactuca sativa
Lsat_1_v5_gn_3_8940 1.0kb downstream 1.0kb downstream 2741   true Lsat_1_v8_lg_3: 11622018-11624758 Lactuca sativa
Lsat_1_v5_gn_3_8940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 11622018-11623017 Lactuca sativa
Lsat_1_v5_gn_3_8940 2.0kb upstream 2.0kb upstream 3741   true Lsat_1_v8_lg_3: 11623018-11626758 Lactuca sativa
Lsat_1_v5_gn_3_8940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 11624759-11626758 Lactuca sativa
Lsat_1_v5_gn_3_8940 2.0kb downstream 2.0kb downstream 3741   true Lsat_1_v8_lg_3: 11621018-11624758 Lactuca sativa
Lsat_1_v5_gn_3_8940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 11621018-11623017 Lactuca sativa
Lsat_1_v5_gn_3_8940 5.0kb upstream 5.0kb upstream 6741   true Lsat_1_v8_lg_3: 11623018-11629758 Lactuca sativa
Lsat_1_v5_gn_3_8940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 11624759-11629758 Lactuca sativa
Lsat_1_v5_gn_3_8940 5.0kb downstream 5.0kb downstream 6741   true Lsat_1_v8_lg_3: 11618018-11624758 Lactuca sativa
Lsat_1_v5_gn_3_8940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 11618018-11623017 Lactuca sativa
Lsat_1_v5_gn_3_8940 10.0kb upstream 10.0kb upstream 11741   true Lsat_1_v8_lg_3: 11623018-11634758 Lactuca sativa
Lsat_1_v5_gn_3_8940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 11624759-11634758 Lactuca sativa
Lsat_1_v5_gn_3_8940 10.0kb downstream 10.0kb downstream 11741   true Lsat_1_v8_lg_3: 11613018-11624758 Lactuca sativa
Lsat_1_v5_gn_3_8940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 11613018-11623017 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469705 5263 Asterids View MSA
123741032 5271 Pentapetalae View MSA
122770001 5272 Eudicot View MSA
122049530 5273 Angiosperm View MSA
121311457 5274 Embryophyte View MSA
123348752 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain