Gene : Lsat_1_v5_gn_3_93460 L. sativa V8
Defline:  (1 of 2) PTHR11850//PTHR11850:SF103 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Genomic Order:  2788
Name:  ? Lsat_1_v5_gn_3_93460 Secondary Identifier:  ? PAC:38918547
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_93460 0.5kb upstream 0.5kb upstream 8223   true Lsat_1_v8_lg_3: 142310758-142318980 Lactuca sativa
Lsat_1_v5_gn_3_93460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 142318481-142318980 Lactuca sativa
Lsat_1_v5_gn_3_93460 0.5kb downstream 0.5kb downstream 8223   true Lsat_1_v8_lg_3: 142310258-142318480 Lactuca sativa
Lsat_1_v5_gn_3_93460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 142310258-142310757 Lactuca sativa
Lsat_1_v5_gn_3_93460 1.0kb upstream 1.0kb upstream 8723   true Lsat_1_v8_lg_3: 142310758-142319480 Lactuca sativa
Lsat_1_v5_gn_3_93460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 142318481-142319480 Lactuca sativa
Lsat_1_v5_gn_3_93460 1.0kb downstream 1.0kb downstream 8723   true Lsat_1_v8_lg_3: 142309758-142318480 Lactuca sativa
Lsat_1_v5_gn_3_93460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 142309758-142310757 Lactuca sativa
Lsat_1_v5_gn_3_93460 2.0kb upstream 2.0kb upstream 9723   true Lsat_1_v8_lg_3: 142310758-142320480 Lactuca sativa
Lsat_1_v5_gn_3_93460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 142318481-142320480 Lactuca sativa
Lsat_1_v5_gn_3_93460 2.0kb downstream 2.0kb downstream 9723   true Lsat_1_v8_lg_3: 142308758-142318480 Lactuca sativa
Lsat_1_v5_gn_3_93460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 142308758-142310757 Lactuca sativa
Lsat_1_v5_gn_3_93460 5.0kb upstream 5.0kb upstream 12723   true Lsat_1_v8_lg_3: 142310758-142323480 Lactuca sativa
Lsat_1_v5_gn_3_93460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 142318481-142323480 Lactuca sativa
Lsat_1_v5_gn_3_93460 5.0kb downstream 5.0kb downstream 12723   true Lsat_1_v8_lg_3: 142305758-142318480 Lactuca sativa
Lsat_1_v5_gn_3_93460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 142305758-142310757 Lactuca sativa
Lsat_1_v5_gn_3_93460 10.0kb upstream 10.0kb upstream 17723   true Lsat_1_v8_lg_3: 142310758-142328480 Lactuca sativa
Lsat_1_v5_gn_3_93460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 142318481-142328480 Lactuca sativa
Lsat_1_v5_gn_3_93460 10.0kb downstream 10.0kb downstream 17723   true Lsat_1_v8_lg_3: 142300758-142318480 Lactuca sativa
Lsat_1_v5_gn_3_93460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 142300758-142310757 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480600 5263 Asterids View MSA
123743533 5271 Pentapetalae View MSA
122796182 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain