Gene : Lsat_1_v5_gn_3_94760 L. sativa V8
Defline:  (1 of 3) 1.5.5.2 - Proline dehydrogenase Genomic Order:  2808
Name:  ? Lsat_1_v5_gn_3_94760 Secondary Identifier:  ? PAC:38917059
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CITRULBIO-PWY Lactuca sativa pathologic  
Lsativa PROUT-PWY Lactuca sativa pathologic  
Lsativa PWY-6922 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_94760 0.5kb upstream 0.5kb upstream 2992   true Lsat_1_v8_lg_3: 144820727-144823718 Lactuca sativa
Lsat_1_v5_gn_3_94760 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 144823219-144823718 Lactuca sativa
Lsat_1_v5_gn_3_94760 0.5kb downstream 0.5kb downstream 2992   true Lsat_1_v8_lg_3: 144820227-144823218 Lactuca sativa
Lsat_1_v5_gn_3_94760 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 144820227-144820726 Lactuca sativa
Lsat_1_v5_gn_3_94760 1.0kb upstream 1.0kb upstream 3492   true Lsat_1_v8_lg_3: 144820727-144824218 Lactuca sativa
Lsat_1_v5_gn_3_94760 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 144823219-144824218 Lactuca sativa
Lsat_1_v5_gn_3_94760 1.0kb downstream 1.0kb downstream 3492   true Lsat_1_v8_lg_3: 144819727-144823218 Lactuca sativa
Lsat_1_v5_gn_3_94760 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 144819727-144820726 Lactuca sativa
Lsat_1_v5_gn_3_94760 2.0kb upstream 2.0kb upstream 4492   true Lsat_1_v8_lg_3: 144820727-144825218 Lactuca sativa
Lsat_1_v5_gn_3_94760 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 144823219-144825218 Lactuca sativa
Lsat_1_v5_gn_3_94760 2.0kb downstream 2.0kb downstream 4492   true Lsat_1_v8_lg_3: 144818727-144823218 Lactuca sativa
Lsat_1_v5_gn_3_94760 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 144818727-144820726 Lactuca sativa
Lsat_1_v5_gn_3_94760 5.0kb upstream 5.0kb upstream 7492   true Lsat_1_v8_lg_3: 144820727-144828218 Lactuca sativa
Lsat_1_v5_gn_3_94760 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 144823219-144828218 Lactuca sativa
Lsat_1_v5_gn_3_94760 5.0kb downstream 5.0kb downstream 7492   true Lsat_1_v8_lg_3: 144815727-144823218 Lactuca sativa
Lsat_1_v5_gn_3_94760 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 144815727-144820726 Lactuca sativa
Lsat_1_v5_gn_3_94760 10.0kb upstream 10.0kb upstream 12492   true Lsat_1_v8_lg_3: 144820727-144833218 Lactuca sativa
Lsat_1_v5_gn_3_94760 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 144823219-144833218 Lactuca sativa
Lsat_1_v5_gn_3_94760 10.0kb downstream 10.0kb downstream 12492   true Lsat_1_v8_lg_3: 144810727-144823218 Lactuca sativa
Lsat_1_v5_gn_3_94760 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 144810727-144820726 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479002 5263 Asterids View MSA
123743697 5271 Pentapetalae View MSA
122792525 5272 Eudicot View MSA
122047709 5273 Angiosperm View MSA
121345691 5274 Embryophyte View MSA
123427745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain