Gene : Lsat_1_v5_gn_3_94620 L. sativa V8
Defline:  (1 of 4) PTHR23076//PTHR23076:SF61 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED Genomic Order:  2810
Name:  ? Lsat_1_v5_gn_3_94620 Secondary Identifier:  ? PAC:38915773
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_94620 0.5kb upstream 0.5kb upstream 5451   true Lsat_1_v8_lg_3: 145150150-145155600 Lactuca sativa
Lsat_1_v5_gn_3_94620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 145155101-145155600 Lactuca sativa
Lsat_1_v5_gn_3_94620 0.5kb downstream 0.5kb downstream 5451   true Lsat_1_v8_lg_3: 145149650-145155100 Lactuca sativa
Lsat_1_v5_gn_3_94620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 145149650-145150149 Lactuca sativa
Lsat_1_v5_gn_3_94620 1.0kb upstream 1.0kb upstream 5951   true Lsat_1_v8_lg_3: 145150150-145156100 Lactuca sativa
Lsat_1_v5_gn_3_94620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 145155101-145156100 Lactuca sativa
Lsat_1_v5_gn_3_94620 1.0kb downstream 1.0kb downstream 5951   true Lsat_1_v8_lg_3: 145149150-145155100 Lactuca sativa
Lsat_1_v5_gn_3_94620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 145149150-145150149 Lactuca sativa
Lsat_1_v5_gn_3_94620 2.0kb upstream 2.0kb upstream 6951   true Lsat_1_v8_lg_3: 145150150-145157100 Lactuca sativa
Lsat_1_v5_gn_3_94620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 145155101-145157100 Lactuca sativa
Lsat_1_v5_gn_3_94620 2.0kb downstream 2.0kb downstream 6951   true Lsat_1_v8_lg_3: 145148150-145155100 Lactuca sativa
Lsat_1_v5_gn_3_94620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 145148150-145150149 Lactuca sativa
Lsat_1_v5_gn_3_94620 5.0kb upstream 5.0kb upstream 9951   true Lsat_1_v8_lg_3: 145150150-145160100 Lactuca sativa
Lsat_1_v5_gn_3_94620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 145155101-145160100 Lactuca sativa
Lsat_1_v5_gn_3_94620 5.0kb downstream 5.0kb downstream 9951   true Lsat_1_v8_lg_3: 145145150-145155100 Lactuca sativa
Lsat_1_v5_gn_3_94620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 145145150-145150149 Lactuca sativa
Lsat_1_v5_gn_3_94620 10.0kb upstream 10.0kb upstream 14951   true Lsat_1_v8_lg_3: 145150150-145165100 Lactuca sativa
Lsat_1_v5_gn_3_94620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 145155101-145165100 Lactuca sativa
Lsat_1_v5_gn_3_94620 10.0kb downstream 10.0kb downstream 14951   true Lsat_1_v8_lg_3: 145140150-145155100 Lactuca sativa
Lsat_1_v5_gn_3_94620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 145140150-145150149 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468868 5263 Asterids View MSA
123737747 5271 Pentapetalae View MSA
122793170 5272 Eudicot View MSA
122045675 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344954 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain