Gene : Lsat_1_v5_gn_3_93941 L. sativa V8
Defline:  (1 of 26) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  2773
Name:  ? Lsat_1_v5_gn_3_93941 Secondary Identifier:  ? PAC:38919965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_93941 0.5kb upstream 0.5kb upstream 2962   true Lsat_1_v8_lg_3: 140855680-140858641 Lactuca sativa
Lsat_1_v5_gn_3_93941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 140855680-140856179 Lactuca sativa
Lsat_1_v5_gn_3_93941 0.5kb downstream 0.5kb downstream 2962   true Lsat_1_v8_lg_3: 140856180-140859141 Lactuca sativa
Lsat_1_v5_gn_3_93941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 140858642-140859141 Lactuca sativa
Lsat_1_v5_gn_3_93941 1.0kb upstream 1.0kb upstream 3462   true Lsat_1_v8_lg_3: 140855180-140858641 Lactuca sativa
Lsat_1_v5_gn_3_93941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 140855180-140856179 Lactuca sativa
Lsat_1_v5_gn_3_93941 1.0kb downstream 1.0kb downstream 3462   true Lsat_1_v8_lg_3: 140856180-140859641 Lactuca sativa
Lsat_1_v5_gn_3_93941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 140858642-140859641 Lactuca sativa
Lsat_1_v5_gn_3_93941 2.0kb upstream 2.0kb upstream 4462   true Lsat_1_v8_lg_3: 140854180-140858641 Lactuca sativa
Lsat_1_v5_gn_3_93941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 140854180-140856179 Lactuca sativa
Lsat_1_v5_gn_3_93941 2.0kb downstream 2.0kb downstream 4462   true Lsat_1_v8_lg_3: 140856180-140860641 Lactuca sativa
Lsat_1_v5_gn_3_93941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 140858642-140860641 Lactuca sativa
Lsat_1_v5_gn_3_93941 5.0kb upstream 5.0kb upstream 7462   true Lsat_1_v8_lg_3: 140851180-140858641 Lactuca sativa
Lsat_1_v5_gn_3_93941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 140851180-140856179 Lactuca sativa
Lsat_1_v5_gn_3_93941 5.0kb downstream 5.0kb downstream 7462   true Lsat_1_v8_lg_3: 140856180-140863641 Lactuca sativa
Lsat_1_v5_gn_3_93941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 140858642-140863641 Lactuca sativa
Lsat_1_v5_gn_3_93941 10.0kb upstream 10.0kb upstream 12462   true Lsat_1_v8_lg_3: 140846180-140858641 Lactuca sativa
Lsat_1_v5_gn_3_93941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 140846180-140856179 Lactuca sativa
Lsat_1_v5_gn_3_93941 10.0kb downstream 10.0kb downstream 12462   true Lsat_1_v8_lg_3: 140856180-140868641 Lactuca sativa
Lsat_1_v5_gn_3_93941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 140858642-140868641 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121452121 5263 Asterids View MSA
123740597 5271 Pentapetalae View MSA
122793166 5272 Eudicot View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain