Gene : Lsat_1_v5_gn_3_52261 L. sativa V8
Defline:  (1 of 3) PTHR22950//PTHR22950:SF246 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  1659
Name:  ? Lsat_1_v5_gn_3_52261 Secondary Identifier:  ? PAC:38918148
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_52261 0.5kb upstream 0.5kb upstream 2833   true Lsat_1_v8_lg_3: 68088799-68091631 Lactuca sativa
Lsat_1_v5_gn_3_52261 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 68088799-68089298 Lactuca sativa
Lsat_1_v5_gn_3_52261 0.5kb downstream 0.5kb downstream 2833   true Lsat_1_v8_lg_3: 68089299-68092131 Lactuca sativa
Lsat_1_v5_gn_3_52261 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 68091632-68092131 Lactuca sativa
Lsat_1_v5_gn_3_52261 1.0kb upstream 1.0kb upstream 3333   true Lsat_1_v8_lg_3: 68088299-68091631 Lactuca sativa
Lsat_1_v5_gn_3_52261 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 68088299-68089298 Lactuca sativa
Lsat_1_v5_gn_3_52261 1.0kb downstream 1.0kb downstream 3333   true Lsat_1_v8_lg_3: 68089299-68092631 Lactuca sativa
Lsat_1_v5_gn_3_52261 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 68091632-68092631 Lactuca sativa
Lsat_1_v5_gn_3_52261 2.0kb upstream 2.0kb upstream 4333   true Lsat_1_v8_lg_3: 68087299-68091631 Lactuca sativa
Lsat_1_v5_gn_3_52261 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 68087299-68089298 Lactuca sativa
Lsat_1_v5_gn_3_52261 2.0kb downstream 2.0kb downstream 4333   true Lsat_1_v8_lg_3: 68089299-68093631 Lactuca sativa
Lsat_1_v5_gn_3_52261 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 68091632-68093631 Lactuca sativa
Lsat_1_v5_gn_3_52261 5.0kb upstream 5.0kb upstream 7333   true Lsat_1_v8_lg_3: 68084299-68091631 Lactuca sativa
Lsat_1_v5_gn_3_52261 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 68084299-68089298 Lactuca sativa
Lsat_1_v5_gn_3_52261 5.0kb downstream 5.0kb downstream 7333   true Lsat_1_v8_lg_3: 68089299-68096631 Lactuca sativa
Lsat_1_v5_gn_3_52261 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 68091632-68096631 Lactuca sativa
Lsat_1_v5_gn_3_52261 10.0kb upstream 10.0kb upstream 12333   true Lsat_1_v8_lg_3: 68079299-68091631 Lactuca sativa
Lsat_1_v5_gn_3_52261 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 68079299-68089298 Lactuca sativa
Lsat_1_v5_gn_3_52261 10.0kb downstream 10.0kb downstream 12333   true Lsat_1_v8_lg_3: 68089299-68101631 Lactuca sativa
Lsat_1_v5_gn_3_52261 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 68091632-68101631 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
121471062 5263 Asterids View MSA
123742441 5271 Pentapetalae View MSA
122795032 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain