Gene : Lsat_1_v5_gn_3_52201 L. sativa V8
Defline:  (1 of 3) PTHR22950//PTHR22950:SF246 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  1660
Name:  ? Lsat_1_v5_gn_3_52201 Secondary Identifier:  ? PAC:38920825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_52201 0.5kb upstream 0.5kb upstream 7075   true Lsat_1_v8_lg_3: 68238521-68245595 Lactuca sativa
Lsat_1_v5_gn_3_52201 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 68238521-68239020 Lactuca sativa
Lsat_1_v5_gn_3_52201 0.5kb downstream 0.5kb downstream 7075   true Lsat_1_v8_lg_3: 68239021-68246095 Lactuca sativa
Lsat_1_v5_gn_3_52201 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 68245596-68246095 Lactuca sativa
Lsat_1_v5_gn_3_52201 1.0kb upstream 1.0kb upstream 7575   true Lsat_1_v8_lg_3: 68238021-68245595 Lactuca sativa
Lsat_1_v5_gn_3_52201 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 68238021-68239020 Lactuca sativa
Lsat_1_v5_gn_3_52201 1.0kb downstream 1.0kb downstream 7575   true Lsat_1_v8_lg_3: 68239021-68246595 Lactuca sativa
Lsat_1_v5_gn_3_52201 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 68245596-68246595 Lactuca sativa
Lsat_1_v5_gn_3_52201 2.0kb upstream 2.0kb upstream 8575   true Lsat_1_v8_lg_3: 68237021-68245595 Lactuca sativa
Lsat_1_v5_gn_3_52201 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 68237021-68239020 Lactuca sativa
Lsat_1_v5_gn_3_52201 2.0kb downstream 2.0kb downstream 8575   true Lsat_1_v8_lg_3: 68239021-68247595 Lactuca sativa
Lsat_1_v5_gn_3_52201 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 68245596-68247595 Lactuca sativa
Lsat_1_v5_gn_3_52201 5.0kb upstream 5.0kb upstream 11575   true Lsat_1_v8_lg_3: 68234021-68245595 Lactuca sativa
Lsat_1_v5_gn_3_52201 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 68234021-68239020 Lactuca sativa
Lsat_1_v5_gn_3_52201 5.0kb downstream 5.0kb downstream 11575   true Lsat_1_v8_lg_3: 68239021-68250595 Lactuca sativa
Lsat_1_v5_gn_3_52201 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 68245596-68250595 Lactuca sativa
Lsat_1_v5_gn_3_52201 10.0kb upstream 10.0kb upstream 16575   true Lsat_1_v8_lg_3: 68229021-68245595 Lactuca sativa
Lsat_1_v5_gn_3_52201 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 68229021-68239020 Lactuca sativa
Lsat_1_v5_gn_3_52201 10.0kb downstream 10.0kb downstream 16575   true Lsat_1_v8_lg_3: 68239021-68255595 Lactuca sativa
Lsat_1_v5_gn_3_52201 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 68245596-68255595 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
121471062 5263 Asterids View MSA
123742441 5271 Pentapetalae View MSA
122795032 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain