Gene : Lsat_1_v5_gn_3_52440 L. sativa V8
Defline:  (1 of 2) PTHR10827 - RETICULOCALBIN Genomic Order:  1654
Name:  ? Lsat_1_v5_gn_3_52440 Secondary Identifier:  ? PAC:38918232
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_52440 0.5kb upstream 0.5kb upstream 1424   true Lsat_1_v8_lg_3: 67694055-67695478 Lactuca sativa
Lsat_1_v5_gn_3_52440 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 67694979-67695478 Lactuca sativa
Lsat_1_v5_gn_3_52440 0.5kb downstream 0.5kb downstream 1424   true Lsat_1_v8_lg_3: 67693555-67694978 Lactuca sativa
Lsat_1_v5_gn_3_52440 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 67693555-67694054 Lactuca sativa
Lsat_1_v5_gn_3_52440 1.0kb upstream 1.0kb upstream 1924   true Lsat_1_v8_lg_3: 67694055-67695978 Lactuca sativa
Lsat_1_v5_gn_3_52440 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 67694979-67695978 Lactuca sativa
Lsat_1_v5_gn_3_52440 1.0kb downstream 1.0kb downstream 1924   true Lsat_1_v8_lg_3: 67693055-67694978 Lactuca sativa
Lsat_1_v5_gn_3_52440 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 67693055-67694054 Lactuca sativa
Lsat_1_v5_gn_3_52440 2.0kb upstream 2.0kb upstream 2924   true Lsat_1_v8_lg_3: 67694055-67696978 Lactuca sativa
Lsat_1_v5_gn_3_52440 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 67694979-67696978 Lactuca sativa
Lsat_1_v5_gn_3_52440 2.0kb downstream 2.0kb downstream 2924   true Lsat_1_v8_lg_3: 67692055-67694978 Lactuca sativa
Lsat_1_v5_gn_3_52440 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 67692055-67694054 Lactuca sativa
Lsat_1_v5_gn_3_52440 5.0kb upstream 5.0kb upstream 5924   true Lsat_1_v8_lg_3: 67694055-67699978 Lactuca sativa
Lsat_1_v5_gn_3_52440 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 67694979-67699978 Lactuca sativa
Lsat_1_v5_gn_3_52440 5.0kb downstream 5.0kb downstream 5924   true Lsat_1_v8_lg_3: 67689055-67694978 Lactuca sativa
Lsat_1_v5_gn_3_52440 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 67689055-67694054 Lactuca sativa
Lsat_1_v5_gn_3_52440 10.0kb upstream 10.0kb upstream 10924   true Lsat_1_v8_lg_3: 67694055-67704978 Lactuca sativa
Lsat_1_v5_gn_3_52440 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 67694979-67704978 Lactuca sativa
Lsat_1_v5_gn_3_52440 10.0kb downstream 10.0kb downstream 10924   true Lsat_1_v8_lg_3: 67684055-67694978 Lactuca sativa
Lsat_1_v5_gn_3_52440 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 67684055-67694054 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477828 5263 Asterids View MSA
123750102 5271 Pentapetalae View MSA
122788650 5272 Eudicot View MSA
122049125 5273 Angiosperm View MSA
121311258 5274 Embryophyte View MSA
123348573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain