Gene : Lsat_1_v5_gn_3_54040 L. sativa V8
Defline:  (1 of 1) PTHR15492//PTHR15492:SF1 - FAMILY NOT NAMED // CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  1786
Name:  ? Lsat_1_v5_gn_3_54040 Secondary Identifier:  ? PAC:38918816
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_54040 0.5kb upstream 0.5kb upstream 2083   true Lsat_1_v8_lg_3: 72029468-72031550 Lactuca sativa
Lsat_1_v5_gn_3_54040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 72031051-72031550 Lactuca sativa
Lsat_1_v5_gn_3_54040 0.5kb downstream 0.5kb downstream 2083   true Lsat_1_v8_lg_3: 72028968-72031050 Lactuca sativa
Lsat_1_v5_gn_3_54040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 72028968-72029467 Lactuca sativa
Lsat_1_v5_gn_3_54040 1.0kb upstream 1.0kb upstream 2583   true Lsat_1_v8_lg_3: 72029468-72032050 Lactuca sativa
Lsat_1_v5_gn_3_54040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 72031051-72032050 Lactuca sativa
Lsat_1_v5_gn_3_54040 1.0kb downstream 1.0kb downstream 2583   true Lsat_1_v8_lg_3: 72028468-72031050 Lactuca sativa
Lsat_1_v5_gn_3_54040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 72028468-72029467 Lactuca sativa
Lsat_1_v5_gn_3_54040 2.0kb upstream 2.0kb upstream 3583   true Lsat_1_v8_lg_3: 72029468-72033050 Lactuca sativa
Lsat_1_v5_gn_3_54040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 72031051-72033050 Lactuca sativa
Lsat_1_v5_gn_3_54040 2.0kb downstream 2.0kb downstream 3583   true Lsat_1_v8_lg_3: 72027468-72031050 Lactuca sativa
Lsat_1_v5_gn_3_54040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 72027468-72029467 Lactuca sativa
Lsat_1_v5_gn_3_54040 5.0kb upstream 5.0kb upstream 6583   true Lsat_1_v8_lg_3: 72029468-72036050 Lactuca sativa
Lsat_1_v5_gn_3_54040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 72031051-72036050 Lactuca sativa
Lsat_1_v5_gn_3_54040 5.0kb downstream 5.0kb downstream 6583   true Lsat_1_v8_lg_3: 72024468-72031050 Lactuca sativa
Lsat_1_v5_gn_3_54040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 72024468-72029467 Lactuca sativa
Lsat_1_v5_gn_3_54040 10.0kb upstream 10.0kb upstream 11583   true Lsat_1_v8_lg_3: 72029468-72041050 Lactuca sativa
Lsat_1_v5_gn_3_54040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 72031051-72041050 Lactuca sativa
Lsat_1_v5_gn_3_54040 10.0kb downstream 10.0kb downstream 11583   true Lsat_1_v8_lg_3: 72019468-72031050 Lactuca sativa
Lsat_1_v5_gn_3_54040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 72019468-72029467 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474134 5263 Asterids View MSA
123740385 5271 Pentapetalae View MSA
122788529 5272 Eudicot View MSA
122041727 5273 Angiosperm View MSA
121346994 5274 Embryophyte View MSA
123425280 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain