Gene : Lsat_1_v5_gn_3_53980 L. sativa V8
Defline:  (1 of 7) PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED Genomic Order:  1789
Name:  ? Lsat_1_v5_gn_3_53980 Secondary Identifier:  ? PAC:38915573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_53980 0.5kb upstream 0.5kb upstream 1262   true Lsat_1_v8_lg_3: 72043433-72044694 Lactuca sativa
Lsat_1_v5_gn_3_53980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 72044195-72044694 Lactuca sativa
Lsat_1_v5_gn_3_53980 0.5kb downstream 0.5kb downstream 1262   true Lsat_1_v8_lg_3: 72042933-72044194 Lactuca sativa
Lsat_1_v5_gn_3_53980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 72042933-72043432 Lactuca sativa
Lsat_1_v5_gn_3_53980 1.0kb upstream 1.0kb upstream 1762   true Lsat_1_v8_lg_3: 72043433-72045194 Lactuca sativa
Lsat_1_v5_gn_3_53980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 72044195-72045194 Lactuca sativa
Lsat_1_v5_gn_3_53980 1.0kb downstream 1.0kb downstream 1762   true Lsat_1_v8_lg_3: 72042433-72044194 Lactuca sativa
Lsat_1_v5_gn_3_53980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 72042433-72043432 Lactuca sativa
Lsat_1_v5_gn_3_53980 2.0kb upstream 2.0kb upstream 2762   true Lsat_1_v8_lg_3: 72043433-72046194 Lactuca sativa
Lsat_1_v5_gn_3_53980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 72044195-72046194 Lactuca sativa
Lsat_1_v5_gn_3_53980 2.0kb downstream 2.0kb downstream 2762   true Lsat_1_v8_lg_3: 72041433-72044194 Lactuca sativa
Lsat_1_v5_gn_3_53980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 72041433-72043432 Lactuca sativa
Lsat_1_v5_gn_3_53980 5.0kb upstream 5.0kb upstream 5762   true Lsat_1_v8_lg_3: 72043433-72049194 Lactuca sativa
Lsat_1_v5_gn_3_53980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 72044195-72049194 Lactuca sativa
Lsat_1_v5_gn_3_53980 5.0kb downstream 5.0kb downstream 5762   true Lsat_1_v8_lg_3: 72038433-72044194 Lactuca sativa
Lsat_1_v5_gn_3_53980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 72038433-72043432 Lactuca sativa
Lsat_1_v5_gn_3_53980 10.0kb upstream 10.0kb upstream 10762   true Lsat_1_v8_lg_3: 72043433-72054194 Lactuca sativa
Lsat_1_v5_gn_3_53980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 72044195-72054194 Lactuca sativa
Lsat_1_v5_gn_3_53980 10.0kb downstream 10.0kb downstream 10762   true Lsat_1_v8_lg_3: 72033433-72044194 Lactuca sativa
Lsat_1_v5_gn_3_53980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 72033433-72043432 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476164 5263 Asterids View MSA
123752217 5271 Pentapetalae View MSA
122794850 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain