Gene : Lsat_1_v5_gn_3_56380 L. sativa V8
Defline:  (1 of 2) PTHR10992//PTHR10992:SF783 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1702
Name:  ? Lsat_1_v5_gn_3_56380 Secondary Identifier:  ? PAC:38920537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_56380 0.5kb upstream 0.5kb upstream 3271   true Lsat_1_v8_lg_3: 69258011-69261281 Lactuca sativa
Lsat_1_v5_gn_3_56380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 69260782-69261281 Lactuca sativa
Lsat_1_v5_gn_3_56380 0.5kb downstream 0.5kb downstream 3271   true Lsat_1_v8_lg_3: 69257511-69260781 Lactuca sativa
Lsat_1_v5_gn_3_56380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 69257511-69258010 Lactuca sativa
Lsat_1_v5_gn_3_56380 1.0kb upstream 1.0kb upstream 3771   true Lsat_1_v8_lg_3: 69258011-69261781 Lactuca sativa
Lsat_1_v5_gn_3_56380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 69260782-69261781 Lactuca sativa
Lsat_1_v5_gn_3_56380 1.0kb downstream 1.0kb downstream 3771   true Lsat_1_v8_lg_3: 69257011-69260781 Lactuca sativa
Lsat_1_v5_gn_3_56380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 69257011-69258010 Lactuca sativa
Lsat_1_v5_gn_3_56380 2.0kb upstream 2.0kb upstream 4771   true Lsat_1_v8_lg_3: 69258011-69262781 Lactuca sativa
Lsat_1_v5_gn_3_56380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 69260782-69262781 Lactuca sativa
Lsat_1_v5_gn_3_56380 2.0kb downstream 2.0kb downstream 4771   true Lsat_1_v8_lg_3: 69256011-69260781 Lactuca sativa
Lsat_1_v5_gn_3_56380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 69256011-69258010 Lactuca sativa
Lsat_1_v5_gn_3_56380 5.0kb upstream 5.0kb upstream 7771   true Lsat_1_v8_lg_3: 69258011-69265781 Lactuca sativa
Lsat_1_v5_gn_3_56380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 69260782-69265781 Lactuca sativa
Lsat_1_v5_gn_3_56380 5.0kb downstream 5.0kb downstream 7771   true Lsat_1_v8_lg_3: 69253011-69260781 Lactuca sativa
Lsat_1_v5_gn_3_56380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 69253011-69258010 Lactuca sativa
Lsat_1_v5_gn_3_56380 10.0kb upstream 10.0kb upstream 12771   true Lsat_1_v8_lg_3: 69258011-69270781 Lactuca sativa
Lsat_1_v5_gn_3_56380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 69260782-69270781 Lactuca sativa
Lsat_1_v5_gn_3_56380 10.0kb downstream 10.0kb downstream 12771   true Lsat_1_v8_lg_3: 69248011-69260781 Lactuca sativa
Lsat_1_v5_gn_3_56380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 69248011-69258010 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475000 5263 Asterids View MSA
123746455 5271 Pentapetalae View MSA
122796232 5272 Eudicot View MSA
122043418 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121348210 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain