Gene : Lsat_1_v5_gn_3_56300 L. sativa V8
Defline:  (1 of 2) PTHR13748:SF31 - COBW DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1686
Name:  ? Lsat_1_v5_gn_3_56300 Secondary Identifier:  ? PAC:38915909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_56300 0.5kb upstream 0.5kb upstream 5099   true Lsat_1_v8_lg_3: 68813140-68818238 Lactuca sativa
Lsat_1_v5_gn_3_56300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 68817739-68818238 Lactuca sativa
Lsat_1_v5_gn_3_56300 0.5kb downstream 0.5kb downstream 5099   true Lsat_1_v8_lg_3: 68812640-68817738 Lactuca sativa
Lsat_1_v5_gn_3_56300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 68812640-68813139 Lactuca sativa
Lsat_1_v5_gn_3_56300 1.0kb upstream 1.0kb upstream 5599   true Lsat_1_v8_lg_3: 68813140-68818738 Lactuca sativa
Lsat_1_v5_gn_3_56300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 68817739-68818738 Lactuca sativa
Lsat_1_v5_gn_3_56300 1.0kb downstream 1.0kb downstream 5599   true Lsat_1_v8_lg_3: 68812140-68817738 Lactuca sativa
Lsat_1_v5_gn_3_56300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 68812140-68813139 Lactuca sativa
Lsat_1_v5_gn_3_56300 2.0kb upstream 2.0kb upstream 6599   true Lsat_1_v8_lg_3: 68813140-68819738 Lactuca sativa
Lsat_1_v5_gn_3_56300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 68817739-68819738 Lactuca sativa
Lsat_1_v5_gn_3_56300 2.0kb downstream 2.0kb downstream 6599   true Lsat_1_v8_lg_3: 68811140-68817738 Lactuca sativa
Lsat_1_v5_gn_3_56300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 68811140-68813139 Lactuca sativa
Lsat_1_v5_gn_3_56300 5.0kb upstream 5.0kb upstream 9599   true Lsat_1_v8_lg_3: 68813140-68822738 Lactuca sativa
Lsat_1_v5_gn_3_56300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 68817739-68822738 Lactuca sativa
Lsat_1_v5_gn_3_56300 5.0kb downstream 5.0kb downstream 9599   true Lsat_1_v8_lg_3: 68808140-68817738 Lactuca sativa
Lsat_1_v5_gn_3_56300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 68808140-68813139 Lactuca sativa
Lsat_1_v5_gn_3_56300 10.0kb upstream 10.0kb upstream 14599   true Lsat_1_v8_lg_3: 68813140-68827738 Lactuca sativa
Lsat_1_v5_gn_3_56300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 68817739-68827738 Lactuca sativa
Lsat_1_v5_gn_3_56300 10.0kb downstream 10.0kb downstream 14599   true Lsat_1_v8_lg_3: 68803140-68817738 Lactuca sativa
Lsat_1_v5_gn_3_56300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 68803140-68813139 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468095 5263 Asterids View MSA
123737333 5271 Pentapetalae View MSA
122789730 5272 Eudicot View MSA
122044727 5273 Angiosperm View MSA
121345063 5274 Embryophyte View MSA
123428327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain