Gene : Lsat_1_v5_gn_3_57300 L. sativa V8
Defline:  (1 of 2) K18749 - protein LSM14 (LSM14, RAP55, SCD6) Genomic Order:  1927
Name:  ? Lsat_1_v5_gn_3_57300 Secondary Identifier:  ? PAC:38919036
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_57300 0.5kb upstream 0.5kb upstream 4902   true Lsat_1_v8_lg_3: 77838398-77843299 Lactuca sativa
Lsat_1_v5_gn_3_57300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 77842800-77843299 Lactuca sativa
Lsat_1_v5_gn_3_57300 0.5kb downstream 0.5kb downstream 4902   true Lsat_1_v8_lg_3: 77837898-77842799 Lactuca sativa
Lsat_1_v5_gn_3_57300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 77837898-77838397 Lactuca sativa
Lsat_1_v5_gn_3_57300 1.0kb upstream 1.0kb upstream 5402   true Lsat_1_v8_lg_3: 77838398-77843799 Lactuca sativa
Lsat_1_v5_gn_3_57300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 77842800-77843799 Lactuca sativa
Lsat_1_v5_gn_3_57300 1.0kb downstream 1.0kb downstream 5402   true Lsat_1_v8_lg_3: 77837398-77842799 Lactuca sativa
Lsat_1_v5_gn_3_57300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 77837398-77838397 Lactuca sativa
Lsat_1_v5_gn_3_57300 2.0kb upstream 2.0kb upstream 6402   true Lsat_1_v8_lg_3: 77838398-77844799 Lactuca sativa
Lsat_1_v5_gn_3_57300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 77842800-77844799 Lactuca sativa
Lsat_1_v5_gn_3_57300 2.0kb downstream 2.0kb downstream 6402   true Lsat_1_v8_lg_3: 77836398-77842799 Lactuca sativa
Lsat_1_v5_gn_3_57300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 77836398-77838397 Lactuca sativa
Lsat_1_v5_gn_3_57300 5.0kb upstream 5.0kb upstream 9402   true Lsat_1_v8_lg_3: 77838398-77847799 Lactuca sativa
Lsat_1_v5_gn_3_57300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 77842800-77847799 Lactuca sativa
Lsat_1_v5_gn_3_57300 5.0kb downstream 5.0kb downstream 9402   true Lsat_1_v8_lg_3: 77833398-77842799 Lactuca sativa
Lsat_1_v5_gn_3_57300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 77833398-77838397 Lactuca sativa
Lsat_1_v5_gn_3_57300 10.0kb upstream 10.0kb upstream 14402   true Lsat_1_v8_lg_3: 77838398-77852799 Lactuca sativa
Lsat_1_v5_gn_3_57300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 77842800-77852799 Lactuca sativa
Lsat_1_v5_gn_3_57300 10.0kb downstream 10.0kb downstream 14402   true Lsat_1_v8_lg_3: 77828398-77842799 Lactuca sativa
Lsat_1_v5_gn_3_57300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 77828398-77838397 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468754 5263 Asterids View MSA
123751625 5271 Pentapetalae View MSA
122797908 5272 Eudicot View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain