Gene : Lsat_1_v5_gn_3_6620 L. sativa V8
Defline:  (1 of 1) 6.3.2.37 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--D-lysine ligase / UDP-MurNAc-L-Ala-D-Glu:D-Lys ligase Genomic Order:  224
Name:  ? Lsat_1_v5_gn_3_6620 Secondary Identifier:  ? PAC:38916456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_6620 0.5kb upstream 0.5kb upstream 4311   true Lsat_1_v8_lg_3: 9983128-9987438 Lactuca sativa
Lsat_1_v5_gn_3_6620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 9983128-9983627 Lactuca sativa
Lsat_1_v5_gn_3_6620 0.5kb downstream 0.5kb downstream 4311   true Lsat_1_v8_lg_3: 9983628-9987938 Lactuca sativa
Lsat_1_v5_gn_3_6620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 9987439-9987938 Lactuca sativa
Lsat_1_v5_gn_3_6620 1.0kb upstream 1.0kb upstream 4811   true Lsat_1_v8_lg_3: 9982628-9987438 Lactuca sativa
Lsat_1_v5_gn_3_6620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 9982628-9983627 Lactuca sativa
Lsat_1_v5_gn_3_6620 1.0kb downstream 1.0kb downstream 4811   true Lsat_1_v8_lg_3: 9983628-9988438 Lactuca sativa
Lsat_1_v5_gn_3_6620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 9987439-9988438 Lactuca sativa
Lsat_1_v5_gn_3_6620 2.0kb upstream 2.0kb upstream 5811   true Lsat_1_v8_lg_3: 9981628-9987438 Lactuca sativa
Lsat_1_v5_gn_3_6620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 9981628-9983627 Lactuca sativa
Lsat_1_v5_gn_3_6620 2.0kb downstream 2.0kb downstream 5811   true Lsat_1_v8_lg_3: 9983628-9989438 Lactuca sativa
Lsat_1_v5_gn_3_6620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 9987439-9989438 Lactuca sativa
Lsat_1_v5_gn_3_6620 5.0kb upstream 5.0kb upstream 8811   true Lsat_1_v8_lg_3: 9978628-9987438 Lactuca sativa
Lsat_1_v5_gn_3_6620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 9978628-9983627 Lactuca sativa
Lsat_1_v5_gn_3_6620 5.0kb downstream 5.0kb downstream 8811   true Lsat_1_v8_lg_3: 9983628-9992438 Lactuca sativa
Lsat_1_v5_gn_3_6620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 9987439-9992438 Lactuca sativa
Lsat_1_v5_gn_3_6620 10.0kb upstream 10.0kb upstream 13811   true Lsat_1_v8_lg_3: 9973628-9987438 Lactuca sativa
Lsat_1_v5_gn_3_6620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 9973628-9983627 Lactuca sativa
Lsat_1_v5_gn_3_6620 10.0kb downstream 10.0kb downstream 13811   true Lsat_1_v8_lg_3: 9983628-9997438 Lactuca sativa
Lsat_1_v5_gn_3_6620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 9987439-9997438 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471841 5263 Asterids View MSA
123746707 5271 Pentapetalae View MSA
122792589 5272 Eudicot View MSA
122042880 5273 Angiosperm View MSA
121344951 5274 Embryophyte View MSA
123428207 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain