Gene : Lsat_1_v5_gn_3_6961 L. sativa V8
Defline:  (1 of 3) PTHR11850//PTHR11850:SF120 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN BEL1 HOMOLOG Genomic Order:  257
Name:  ? Lsat_1_v5_gn_3_6961 Secondary Identifier:  ? PAC:38915033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_6961 0.5kb upstream 0.5kb upstream 3787   true Lsat_1_v8_lg_3: 11461279-11465065 Lactuca sativa
Lsat_1_v5_gn_3_6961 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 11461279-11461778 Lactuca sativa
Lsat_1_v5_gn_3_6961 0.5kb downstream 0.5kb downstream 3787   true Lsat_1_v8_lg_3: 11461779-11465565 Lactuca sativa
Lsat_1_v5_gn_3_6961 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 11465066-11465565 Lactuca sativa
Lsat_1_v5_gn_3_6961 1.0kb upstream 1.0kb upstream 4287   true Lsat_1_v8_lg_3: 11460779-11465065 Lactuca sativa
Lsat_1_v5_gn_3_6961 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 11460779-11461778 Lactuca sativa
Lsat_1_v5_gn_3_6961 1.0kb downstream 1.0kb downstream 4287   true Lsat_1_v8_lg_3: 11461779-11466065 Lactuca sativa
Lsat_1_v5_gn_3_6961 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 11465066-11466065 Lactuca sativa
Lsat_1_v5_gn_3_6961 2.0kb upstream 2.0kb upstream 5287   true Lsat_1_v8_lg_3: 11459779-11465065 Lactuca sativa
Lsat_1_v5_gn_3_6961 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 11459779-11461778 Lactuca sativa
Lsat_1_v5_gn_3_6961 2.0kb downstream 2.0kb downstream 5287   true Lsat_1_v8_lg_3: 11461779-11467065 Lactuca sativa
Lsat_1_v5_gn_3_6961 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 11465066-11467065 Lactuca sativa
Lsat_1_v5_gn_3_6961 5.0kb upstream 5.0kb upstream 8287   true Lsat_1_v8_lg_3: 11456779-11465065 Lactuca sativa
Lsat_1_v5_gn_3_6961 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 11456779-11461778 Lactuca sativa
Lsat_1_v5_gn_3_6961 5.0kb downstream 5.0kb downstream 8287   true Lsat_1_v8_lg_3: 11461779-11470065 Lactuca sativa
Lsat_1_v5_gn_3_6961 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 11465066-11470065 Lactuca sativa
Lsat_1_v5_gn_3_6961 10.0kb upstream 10.0kb upstream 13287   true Lsat_1_v8_lg_3: 11451779-11465065 Lactuca sativa
Lsat_1_v5_gn_3_6961 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 11451779-11461778 Lactuca sativa
Lsat_1_v5_gn_3_6961 10.0kb downstream 10.0kb downstream 13287   true Lsat_1_v8_lg_3: 11461779-11475065 Lactuca sativa
Lsat_1_v5_gn_3_6961 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 11465066-11475065 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474305 5263 Asterids View MSA
123740482 5271 Pentapetalae View MSA
122791610 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain