Gene : Lsat_1_v5_gn_4_122980 L. sativa V8
Defline:  (1 of 2) PF04129//PF09763 - Vps52 / Sac2 family (Vps52) // Exocyst complex component Sec3 (Sec3_C) Genomic Order:  3474
Name:  ? Lsat_1_v5_gn_4_122980 Secondary Identifier:  ? PAC:38930980
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_122980 0.5kb upstream 0.5kb upstream 7238   true Lsat_1_v8_lg_4: 218666191-218673428 Lactuca sativa
Lsat_1_v5_gn_4_122980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 218666191-218666690 Lactuca sativa
Lsat_1_v5_gn_4_122980 0.5kb downstream 0.5kb downstream 7238   true Lsat_1_v8_lg_4: 218666691-218673928 Lactuca sativa
Lsat_1_v5_gn_4_122980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 218673429-218673928 Lactuca sativa
Lsat_1_v5_gn_4_122980 1.0kb upstream 1.0kb upstream 7738   true Lsat_1_v8_lg_4: 218665691-218673428 Lactuca sativa
Lsat_1_v5_gn_4_122980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 218665691-218666690 Lactuca sativa
Lsat_1_v5_gn_4_122980 1.0kb downstream 1.0kb downstream 7738   true Lsat_1_v8_lg_4: 218666691-218674428 Lactuca sativa
Lsat_1_v5_gn_4_122980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 218673429-218674428 Lactuca sativa
Lsat_1_v5_gn_4_122980 2.0kb upstream 2.0kb upstream 8738   true Lsat_1_v8_lg_4: 218664691-218673428 Lactuca sativa
Lsat_1_v5_gn_4_122980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 218664691-218666690 Lactuca sativa
Lsat_1_v5_gn_4_122980 2.0kb downstream 2.0kb downstream 8738   true Lsat_1_v8_lg_4: 218666691-218675428 Lactuca sativa
Lsat_1_v5_gn_4_122980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 218673429-218675428 Lactuca sativa
Lsat_1_v5_gn_4_122980 5.0kb upstream 5.0kb upstream 11738   true Lsat_1_v8_lg_4: 218661691-218673428 Lactuca sativa
Lsat_1_v5_gn_4_122980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 218661691-218666690 Lactuca sativa
Lsat_1_v5_gn_4_122980 5.0kb downstream 5.0kb downstream 11738   true Lsat_1_v8_lg_4: 218666691-218678428 Lactuca sativa
Lsat_1_v5_gn_4_122980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 218673429-218678428 Lactuca sativa
Lsat_1_v5_gn_4_122980 10.0kb upstream 10.0kb upstream 16738   true Lsat_1_v8_lg_4: 218656691-218673428 Lactuca sativa
Lsat_1_v5_gn_4_122980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 218656691-218666690 Lactuca sativa
Lsat_1_v5_gn_4_122980 10.0kb downstream 10.0kb downstream 16738   true Lsat_1_v8_lg_4: 218666691-218683428 Lactuca sativa
Lsat_1_v5_gn_4_122980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 218673429-218683428 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478471 5263 Asterids View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain