Gene : Lsat_1_v5_gn_4_122020 L. sativa V8
Defline:  (1 of 3) PTHR12320//PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  3429
Name:  ? Lsat_1_v5_gn_4_122020 Secondary Identifier:  ? PAC:38935437
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_122020 0.5kb upstream 0.5kb upstream 3553   true Lsat_1_v8_lg_4: 215185113-215188665 Lactuca sativa
Lsat_1_v5_gn_4_122020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 215185113-215185612 Lactuca sativa
Lsat_1_v5_gn_4_122020 0.5kb downstream 0.5kb downstream 3553   true Lsat_1_v8_lg_4: 215185613-215189165 Lactuca sativa
Lsat_1_v5_gn_4_122020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 215188666-215189165 Lactuca sativa
Lsat_1_v5_gn_4_122020 1.0kb upstream 1.0kb upstream 4053   true Lsat_1_v8_lg_4: 215184613-215188665 Lactuca sativa
Lsat_1_v5_gn_4_122020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 215184613-215185612 Lactuca sativa
Lsat_1_v5_gn_4_122020 1.0kb downstream 1.0kb downstream 4053   true Lsat_1_v8_lg_4: 215185613-215189665 Lactuca sativa
Lsat_1_v5_gn_4_122020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 215188666-215189665 Lactuca sativa
Lsat_1_v5_gn_4_122020 2.0kb upstream 2.0kb upstream 5053   true Lsat_1_v8_lg_4: 215183613-215188665 Lactuca sativa
Lsat_1_v5_gn_4_122020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 215183613-215185612 Lactuca sativa
Lsat_1_v5_gn_4_122020 2.0kb downstream 2.0kb downstream 5053   true Lsat_1_v8_lg_4: 215185613-215190665 Lactuca sativa
Lsat_1_v5_gn_4_122020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 215188666-215190665 Lactuca sativa
Lsat_1_v5_gn_4_122020 5.0kb upstream 5.0kb upstream 8053   true Lsat_1_v8_lg_4: 215180613-215188665 Lactuca sativa
Lsat_1_v5_gn_4_122020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 215180613-215185612 Lactuca sativa
Lsat_1_v5_gn_4_122020 5.0kb downstream 5.0kb downstream 8053   true Lsat_1_v8_lg_4: 215185613-215193665 Lactuca sativa
Lsat_1_v5_gn_4_122020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 215188666-215193665 Lactuca sativa
Lsat_1_v5_gn_4_122020 10.0kb upstream 10.0kb upstream 13053   true Lsat_1_v8_lg_4: 215175613-215188665 Lactuca sativa
Lsat_1_v5_gn_4_122020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 215175613-215185612 Lactuca sativa
Lsat_1_v5_gn_4_122020 10.0kb downstream 10.0kb downstream 13053   true Lsat_1_v8_lg_4: 215185613-215198665 Lactuca sativa
Lsat_1_v5_gn_4_122020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 215188666-215198665 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477943 5263 Asterids View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain