Gene : Lsat_1_v5_gn_4_12500 L. sativa V8
Defline:  (1 of 3) K15305 - vacuole morphology and inheritance protein 14 (VAC14, TAX1BP2) Genomic Order:  352
Name:  ? Lsat_1_v5_gn_4_12500 Secondary Identifier:  ? PAC:38934186
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_12500 0.5kb upstream 0.5kb upstream 4311   true Lsat_1_v8_lg_4: 17994161-17998471 Lactuca sativa
Lsat_1_v5_gn_4_12500 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 17994161-17994660 Lactuca sativa
Lsat_1_v5_gn_4_12500 0.5kb downstream 0.5kb downstream 4311   true Lsat_1_v8_lg_4: 17994661-17998971 Lactuca sativa
Lsat_1_v5_gn_4_12500 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 17998472-17998971 Lactuca sativa
Lsat_1_v5_gn_4_12500 1.0kb upstream 1.0kb upstream 4811   true Lsat_1_v8_lg_4: 17993661-17998471 Lactuca sativa
Lsat_1_v5_gn_4_12500 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 17993661-17994660 Lactuca sativa
Lsat_1_v5_gn_4_12500 1.0kb downstream 1.0kb downstream 4811   true Lsat_1_v8_lg_4: 17994661-17999471 Lactuca sativa
Lsat_1_v5_gn_4_12500 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 17998472-17999471 Lactuca sativa
Lsat_1_v5_gn_4_12500 2.0kb upstream 2.0kb upstream 5811   true Lsat_1_v8_lg_4: 17992661-17998471 Lactuca sativa
Lsat_1_v5_gn_4_12500 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 17992661-17994660 Lactuca sativa
Lsat_1_v5_gn_4_12500 2.0kb downstream 2.0kb downstream 5811   true Lsat_1_v8_lg_4: 17994661-18000471 Lactuca sativa
Lsat_1_v5_gn_4_12500 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 17998472-18000471 Lactuca sativa
Lsat_1_v5_gn_4_12500 5.0kb upstream 5.0kb upstream 8811   true Lsat_1_v8_lg_4: 17989661-17998471 Lactuca sativa
Lsat_1_v5_gn_4_12500 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 17989661-17994660 Lactuca sativa
Lsat_1_v5_gn_4_12500 5.0kb downstream 5.0kb downstream 8811   true Lsat_1_v8_lg_4: 17994661-18003471 Lactuca sativa
Lsat_1_v5_gn_4_12500 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 17998472-18003471 Lactuca sativa
Lsat_1_v5_gn_4_12500 10.0kb upstream 10.0kb upstream 13811   true Lsat_1_v8_lg_4: 17984661-17998471 Lactuca sativa
Lsat_1_v5_gn_4_12500 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 17984661-17994660 Lactuca sativa
Lsat_1_v5_gn_4_12500 10.0kb downstream 10.0kb downstream 13811   true Lsat_1_v8_lg_4: 17994661-18008471 Lactuca sativa
Lsat_1_v5_gn_4_12500 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 17998472-18008471 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784994 5273 Angiosperm View MSA
121465407 5263 Asterids View MSA
123757206 5271 Pentapetalae View MSA
122778277 5272 Eudicot View MSA
121056395 5274 Embryophyte View MSA
123428205 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain